Pairwise Alignments

Query, 858 a.a., leucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 947 a.a., valyl-tRNA synthetase from Sinorhizobium meliloti 1021

 Score =  118 bits (296), Expect = 1e-30
 Identities = 115/431 (26%), Positives = 172/431 (39%), Gaps = 101/431 (23%)

Query: 1   MQEQYNPQDIEHKVQQHWDNNKTFV--VSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTI 58
           + + Y+   +E K+ + WD    F   V+  P+ E F  +   P  +G LHMGH  N T+
Sbjct: 2   LDKTYDSAAVEPKIAKAWDEADAFRAGVNAKPDAETFTIVIPPPNVTGSLHMGHALNNTL 61

Query: 59  GDVVSRFQRLQGKNVLQPIGWDAFGLPAE---NAAVKNNTAPA--------------PWT 101
            D++ RF+R++GK+VL   G D  G+  +      +     P+               W 
Sbjct: 62  QDIMVRFERMRGKDVLWQPGMDHAGIATQMVVERQLMERQLPSRRDMGREAFIERVWEWK 121

Query: 102 YENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVYKKTSSVNWCPN 161
            E+   + NQLK LG   DW+RE  T          E F  L+ +GL+Y+ T  VNW P 
Sbjct: 122 AESGGLIFNQLKRLGASCDWSRERFTMDEGLSEAVIEVFVSLYKEGLIYRDTRLVNWDPK 181

Query: 162 DQTVLANEQVE----DGCCWRCDTPVEQKEIPQWFIKITAYAQELLDDLDNLDGWPEMVK 217
            QT +++ +VE    +G  W    P+E+         +T       D+  N   W     
Sbjct: 182 LQTAISDIEVEPVEVNGHLWHLRYPLEE--------GVTYQHPVAFDEDGNATEWE---- 229

Query: 218 TMQRNWIGRSEGVELKFAVKGENTDLEVYTTRPDTLMGVTYVGIAAGHPLATKAAANNPA 277
              RN+                   L V TTRP+T++G T V +   HP           
Sbjct: 230 --TRNY-------------------LVVATTRPETMLGDTGVAV---HP----------- 254

Query: 278 LAAFIDECKNTKVAEAEIATMEKKGMATGLTAIHPLNGREVPIYIANFVLMDYGTGAVMA 337
                               +  KG+  G   I P+ GR +PI    +     GTGAV  
Sbjct: 255 ------------------DDVRYKGI-VGKHVILPIVGRRIPIVADEYPDPTTGTGAVKM 295

Query: 338 VPAHDQRDFEFATKYGLDIIPVIKPADGSELDVSEAAYTEKGVLFASGEFDGLDFQAAFN 397
            PAHD  DF+   + GL  + V+  ADG     +   + E           GLD  AA +
Sbjct: 296 TPAHDFNDFDVGKRQGLRQVNVL-TADGRITIKNNEDFLE-----------GLDHPAALH 343

Query: 398 AIAAKLEAEGK 408
               +LE + +
Sbjct: 344 GAWDRLEGKDR 354



 Score = 61.6 bits (148), Expect = 2e-13
 Identities = 97/457 (21%), Positives = 171/457 (37%), Gaps = 95/457 (20%)

Query: 417 LRDWGVSRQRYWGAPIPMVTTEDGQVHPVPADQ--LPVILPEDVVMDGVTSPIKADKEWA 474
           ++ W +SRQ +WG  IP     DGQ+     ++  L   +   +  +G   P+KA  E  
Sbjct: 437 IQPWCISRQLWWGHQIPAWYGPDGQIFVERNEEEALHAAIQHYIAHEG---PMKAYVEDL 493

Query: 475 KTTFN-GEPALRETDTFDTFMESS-WYYARYCSPQADDILDPEKANYWLPVDQYIGGIEH 532
              F  GE   R+ D  DT+  S+ W ++    P+    LD      +   D  + G + 
Sbjct: 494 LENFKPGEILTRDEDVLDTWFSSALWPFSTLGWPKETPELDK-----YYQTDVLVTGFD- 547

Query: 533 ACMHLLYSRFFHKLLRDAGYVKSD-----EPFKKLLCQGMVLADAFYYTNDKGGKEWVSP 587
               +++      ++    ++K       EPF  +    +V         DK G+     
Sbjct: 548 ----IIFFWVARMMMMGLHFMKDADGTPVEPFHTVYVHALV--------RDKNGQ----- 590

Query: 588 TEVKVERDGKGRIVSAVDATGRQVEHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMF 647
                                         KMSKSK N IDP E++D+YGAD +R  +  
Sbjct: 591 ------------------------------KMSKSKGNVIDPLELIDEYGADALRFTLAI 620

Query: 648 ASPADMTLEWQESGVEGANRFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKT 707
            +     ++   + + G   F  ++W   R   E+  A + +     A    + R +   
Sbjct: 621 MAAQGRDVKLDPARIAGYRNFGTKLWNATR-FAEMNGAISSEGFIPEAASLTINRWILTE 679

Query: 708 IAKVTDDVARR---QTFNTAIAAI------------MELMNKLTKA--PMTEAQDRAILD 750
           +++   DV+       FN A  A+            +EL+  +        + + +A   
Sbjct: 680 LSRTIRDVSEAIEDYRFNEAAGALYRFVWNQFCDWYLELLKPVFNGDDEAAKRESQACTA 739

Query: 751 EALKAITLMLYPITPHICFEMW-VALGQSNIDT-----ASWPT--YDEAALVEDEKLIVL 802
             L  I  +L+P  P +  E+W    G     T     A WP   Y + A  ++   ++ 
Sbjct: 740 YVLDEIYKLLHPFMPFMTEELWEKTTGPGRERTTLLCHAEWPAAFYADDAAADEINWLID 799

Query: 803 QVNG--KLRGKLTV--AADATQQQVEALGMQDENVQK 835
            V+G   +R ++ V  AA A    V A  +  E + +
Sbjct: 800 LVSGIRSVRAEMNVPPAAMAPLVIVGAKALTSERLDR 836