Pairwise Alignments

Query, 858 a.a., leucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 876 a.a., leucine--tRNA ligase from Rhodopseudomonas palustris CGA009

 Score =  757 bits (1954), Expect = 0.0
 Identities = 402/878 (45%), Positives = 542/878 (61%), Gaps = 30/878 (3%)

Query: 3   EQYNPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVV 62
           E+YN ++ E K Q  WD  K F    D  ++K+Y L MFPYPSGR+HMGHVRNYT+GDVV
Sbjct: 4   ERYNARESEPKWQAKWDEAKIFATRNDDLRKKYYVLEMFPYPSGRIHMGHVRNYTMGDVV 63

Query: 63  SRFQRLQGKNVLQPIGWDAFGLPAENAAVKNNTAPAPWTYENIEYMKNQLKLLGFGYDWN 122
           +R  R +G NVL P+GWDAFGLPAENAA++   AP  WTY+NI  MK QL+ +G   DW 
Sbjct: 64  ARTMRARGYNVLHPMGWDAFGLPAENAAIERKVAPKAWTYDNIAAMKKQLQTMGLSLDWA 123

Query: 123 REFATCRPEYYRWEQEFFTKLFAKGLVYKKTSSVNWCPNDQTVLANEQVEDGCCWRCDTP 182
           REFATC P YY+ +Q+ F      GLV ++   +NW P D TVLANEQV DG  WR    
Sbjct: 124 REFATCDPSYYKHQQKMFLDFLKVGLVEREKRKLNWDPVDMTVLANEQVIDGRGWRSGAV 183

Query: 183 VEQKEIPQWFIKITAYAQELLDDLDNLDGWPEMVKTMQRNWIGRSEGVELKFAVKGE--- 239
           VE +E+ QW  KIT YAQELLD LD LD WP+ V+ MQRNWIGRSEG+ ++FA+      
Sbjct: 184 VELREMNQWVFKITKYAQELLDALDTLDRWPDKVRLMQRNWIGRSEGLMVRFALDSATTP 243

Query: 240 --NTDLEVYTTRPDTLMGVTYVGIAAGHPLATKAAANNPALAAFIDECKNTKVAEAEIAT 297
              T+L+++TTRPDTL G  ++ IAA HPLA  AAA  P +AAFID+CK    A+AEI T
Sbjct: 244 AGETELKIFTTRPDTLFGAKFMAIAADHPLAQAAAAKAPKVAAFIDDCKKRGTAQAEIDT 303

Query: 298 MEKKGMATGLTAIHPLN-GREVPIYIANFVLMDYGTGAVMAVPAHDQRDFEFATKYGLDI 356
            EK+G+ TG+ A+HP +   ++P+Y+ANFVLM+YGTGA+   PAHDQRD +F  KY L  
Sbjct: 304 AEKQGIDTGIRAVHPFDPSWKLPVYVANFVLMEYGTGAIFGCPAHDQRDLDFVNKYQLGN 363

Query: 357 IPVIKP--ADGSELDVSEAAYTEKGVLFASGEFDGLDFQAAFNAIAAKLEAE-----GKG 409
            PV+ P   D +   +++ AY  +G +  S   DG     A   +A +LE E       G
Sbjct: 364 TPVVCPEGQDPASFVITDTAYDGEGRMINSRFLDGKTIAEAKEEVAKRLETEQLAGAPVG 423

Query: 410 KKTVNFRLRDWGVSRQRYWGAPIPMVTTEDGQVHPVPADQLPVILPEDVVMDGVTSPIKA 469
            + VNFRLRDWG+SRQRYWG PIP++      V PVP   LPV+LPEDV  D   + +  
Sbjct: 424 ARKVNFRLRDWGISRQRYWGCPIPIIHCPTCDVVPVPDADLPVVLPEDVSFDKPGNALDH 483

Query: 470 DKEWAKTTFN--GEPALRETDTFDTFMESSWYYARYCSP-QADDILDPEKANYWLPVDQY 526
              W   T    G  A+RETDT DTF++SSWY+AR+  P   +    P+  N  +PVDQY
Sbjct: 484 HPTWKHVTCPKCGGKAVRETDTMDTFVDSSWYFARFTDPWNTEAPTTPDVVNRMMPVDQY 543

Query: 527 IGGIEHACMHLLYSRFFHKLLRDAGY--VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEW 584
           IGG+EHA +HLLYSRFF + ++ AG+  ++ DEPF  L  QGMV+    + T  K    +
Sbjct: 544 IGGVEHAILHLLYSRFFTRAMKAAGHIDIQHDEPFAGLFTQGMVV----HETYRKADGHF 599

Query: 585 VSPTEVKVERDGKGRIVSAVDATGRQVEHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLF 644
            SP E+ +  +G  R  + +D  G  VE   + KMSKSK N +DP +++  YGADT R F
Sbjct: 600 ASPAEISITVEGDTRRATLLDG-GSPVEIGPIEKMSKSKRNTVDPDDIIGTYGADTARWF 658

Query: 645 MMFASPADMTLEWQESGVEGANRFLRRVWKLVREHTEL-GQAPALDASALNADQKALRRD 703
           M+  SP D  + W E GV+GA+RF++R+W++V +   +   APA   ++  AD   LR+ 
Sbjct: 659 MLSDSPPDRDVIWSEEGVKGASRFVQRLWRMVNDAAPIAASAPAERPASFGADALTLRKA 718

Query: 704 VHKTIAKVTDDVARRQTFNTAIAAIMELMNKLTKA---PMTEAQDRA-ILDEALKAITLM 759
            H  + KV   +  R  FN ++A I E  N L  A     T + D A  + E+   +  +
Sbjct: 719 AHGALDKVLSGI-ERLAFNVSLAHIREFSNTLGDALARSQTPSPDLAWAIRESTVILVQL 777

Query: 760 LYPITPHICFEMWVALGQSN-IDTASWPTYDEAALVEDEKLIVLQVNGKLRGKLTVAADA 818
            +P+ PH+  E W  LGQ+  +  A WP  ++  LVED   + +QVNGK RG +TV  DA
Sbjct: 778 FHPMMPHLAEECWTVLGQTGLVSEALWPPIEQDLLVEDSITLPVQVNGKKRGDVTVPRDA 837

Query: 819 TQQQVEALGMQDENVQKFIDGLTVRKVIYVPGKLLNIV 856
              ++EA  +  + V++ + G  VRKVI VP +++N+V
Sbjct: 838 PTSEIEAAVLALDTVKQALGGKPVRKVIVVPQRIVNVV 875