Pairwise Alignments

Query, 858 a.a., leucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 959 a.a., valyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  128 bits (321), Expect = 2e-33
 Identities = 203/924 (21%), Positives = 350/924 (37%), Gaps = 210/924 (22%)

Query: 1   MQEQYNPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGD 60
           M++ YNPQ IE  + Q+W+    F    D +   +  +   P  +G LHMGH    TI D
Sbjct: 1   MEKTYNPQSIEQALYQNWEEKGYFKPHGDESNGNYCIMIPPPNVTGSLHMGHAFQDTIMD 60

Query: 61  VVSRFQRLQGKNVLQPIGWDAFGLPAENAAVKNNTAPA-----------------PWTYE 103
            + R+QR++GKN L  +G D  G+  +    +   A                    W  +
Sbjct: 61  TLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKVEAEEGKSRHDLGRETFIDRIWDWKNQ 120

Query: 104 NIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVYKKTSSVNWCPNDQ 163
           +   +  QL+ LG   DW+RE  T         QE F +L+   L+Y+    VNW P   
Sbjct: 121 SGGTITKQLRRLGASVDWDRERFTMDEGMSAAVQEVFVRLYNDDLIYRGKRLVNWDPKLH 180

Query: 164 TVLANEQVEDGCCWRCDTPVEQKEIPQWFIKITAYAQELLDDLDNLDGWPEMVKTMQRNW 223
           T +++ +VE+          ++K+   W      +   L D     DG            
Sbjct: 181 TAISDLEVEN----------KEKQGSMWH-----FRYPLADGALTADG------------ 213

Query: 224 IGRSEGVELKFAVKGENTDLEVYTTRPDTLMGVTYVGIAAGHPLATKAAANNPALAAFID 283
                              LEV TTRP+T++G + V +   HP                D
Sbjct: 214 ----------------KDYLEVATTRPETMLGDSAVAV---HP----------------D 238

Query: 284 ECKNTKVAEAEIATMEKKGMATGLTAIHPLNGREVPIYIANFVLMDYGTGAVMAVPAHDQ 343
           +              E+     G   + P+  R +PI   ++V M++GTG V   PAHD 
Sbjct: 239 D--------------ERYQSLIGKFILLPIVNRRIPIVADDYVDMEFGTGCVKITPAHDF 284

Query: 344 RDFEFATKYGLDI--IPVIKPADGSELDVSEAAYTEKGVLFAS--GEFDGLDFQAAFNAI 399
            D+E   ++ L +  I  I  A  S+ +V  +  T    L  S    F GLD   A  AI
Sbjct: 285 NDYEVGKRHNLPMFNILTIDAAIRSQAEVVNSDGTANDELDGSLPERFAGLDRFKARTAI 344

Query: 400 AAKLEAEG-KGKKTVNFRLRDWG---------VSRQRYWGAPIPMVTT-----EDGQVHP 444
             + E+ G  GK   +     +G         +   +++ A  PM  T     E+G +  
Sbjct: 345 VDEFESLGLLGKIDPHALKVPYGDRSGVVIEPLLTDQWYVAVAPMAKTAIEAVENGDIKF 404

Query: 445 VPA--DQLPVILPEDV--------VMDGVTSPIKADKEW------------AKTTFNGEP 482
           VP   + +      D+        +  G   P   D+              AK   +   
Sbjct: 405 VPQQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGKVYVGRDEAEVRAKHNLDDSV 464

Query: 483 ALR-ETDTFDTFMESS-WYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYS 540
            LR + D  DT+  S+ W ++    P      D E    + P D  + G +     +++ 
Sbjct: 465 VLRQDPDVLDTWFSSALWTFSTLGWPD-----DTEALKTFHPTDVLVTGFD-----IIFF 514

Query: 541 RFFHKLLRDAGYVKSDE-----PFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERD 595
                ++    ++K ++     PFK +   G++        +++G K   S   V    D
Sbjct: 515 WVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLI-------RDEQGNKMSKSKGNVLDPLD 567

Query: 596 GKGRIVSAVD-------ATGRQVEHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFA 648
               ++  +D        TG  ++     K+ KS     +  + ++ +G D +R  +   
Sbjct: 568 ----MIDGIDLEALVEKRTGNMMQPQLAAKIEKSTRK--EFADGIEAHGTDALRFTLAAM 621

Query: 649 SPADMTLEWQESGVEGANRFLRRVWKLVR------EHTELG-QAPALDASA---LNADQK 698
           +     + W    ++G   F  ++W   R      E  + G Q+P   A     L+   +
Sbjct: 622 ASTGRDINWDMKRLDGYRSFCNKIWNASRYVLMNTEEQDCGPQSPNGKADGEMQLSLADR 681

Query: 699 ALRRDVHKTIAKVTDDVARRQTFNTAIAAIMEL--------MNKLTKAPM---TEAQDRA 747
            +    ++T+ K  D+      F+ A   + E           +LTK  +   TEA+ R 
Sbjct: 682 WIVGLFNQTV-KAFDEHMENYRFDLAANTLYEFTWNQFCDWYLELTKPVLQNGTEAEQRG 740

Query: 748 ---ILDEALKAITLMLYPITPHICFEMW------VALGQSNIDTASWPTY-----DEAAL 793
               L   L+A+  +L+P+ P++   +W        +    +  A +P Y     DEAA+
Sbjct: 741 TRHTLVTVLEAMQRLLHPMMPYLTETIWQRVKPLAGVEGDTLMLAEFPVYQASKVDEAAM 800

Query: 794 VEDE--KLIVLQVNGKLRGKLTVA 815
            + E  K +++ V   +R +L +A
Sbjct: 801 ADLEWVKQVIVAVR-NIRAELNIA 823