Pairwise Alignments

Query, 858 a.a., leucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 886 a.a., valine--tRNA ligase from Methanococcus maripaludis S2

 Score =  141 bits (355), Expect = 2e-37
 Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 14/185 (7%)

Query: 1   MQEQYNPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGD 60
           ++E+Y+ + +E KVQ+ W++ KTF   +D  +  +   +  PYP+GR+H+GH  N+T  D
Sbjct: 3   IKEEYSIE-LEKKVQEKWEDEKTFKFLDDEKRPPYIIDTPPPYPTGRMHLGHGLNWTYMD 61

Query: 61  VVSRFQRLQGKNVLQPIGWDAFGLPAENAAVKNNTAP-------------APWTYENIEY 107
           +++RF+R+ G +VL P GWD  GLP E    + N                   T EN+E 
Sbjct: 62  IIARFKRMNGYDVLFPQGWDCHGLPTEVKVEELNNITKSDIDRHEFRRLCVELTDENVEK 121

Query: 108 MKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVYKKTSSVNWCPNDQTVLA 167
           M+ Q++ LG   DW+RE+ T  P+Y R  Q  F K++ KGL+Y+    VNWCP  +T +A
Sbjct: 122 MRGQVRSLGISIDWDREYITMNPDYVRKSQTAFLKMYEKGLIYRGKHPVNWCPRCETAIA 181

Query: 168 NEQVE 172
             +VE
Sbjct: 182 FAEVE 186



 Score = 63.9 bits (154), Expect = 4e-14
 Identities = 99/423 (23%), Positives = 165/423 (39%), Gaps = 127/423 (30%)

Query: 419 DWGVSRQRYWGAPIPMVTTEDGQVHPVPADQLPVILPEDVVMDGVTSPIKADKEWAKTTF 478
           DW +SRQR +  PIP+   +D         ++ V  PED+       PI   KE   T  
Sbjct: 395 DWCISRQRLFATPIPVWYCKD-------CGEIIVAKPEDL-------PIDPTKESPYTCK 440

Query: 479 NGEPAL-RETDTFDTFMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHL 537
            G   L  ETD  DT+M+SS              + P     WL  +++    +H  + L
Sbjct: 441 CGNSNLVAETDVLDTWMDSS--------------ITPLVIAGWLEDEEFFK--KHYPVQL 484

Query: 538 -------LYSRFFHKLLRDAGYVKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEV 590
                  + +  F+ ++R    +  ++P+ +++  GMV  +                   
Sbjct: 485 RPQGHDIIRTWAFYTMVRSLA-ITGEKPWDEIVINGMVFGE------------------- 524

Query: 591 KVERDGKGRIVSAVDATGRQVEHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFAS- 649
               DG                     KMSKS+ N ++P E+   YGAD +RL+   ++ 
Sbjct: 525 ----DG--------------------FKMSKSRGNVVEPGEITKTYGADALRLWASNSTI 560

Query: 650 PADMTLEWQESGVEGANRFLRRVW------KLVREHTELGQAPALDASAL-NADQKALRR 702
             D+   W+E  VE   RFLR++W      K+      + +  +L++ ++ N     +  
Sbjct: 561 GKDVPFAWKE--VEYGGRFLRKIWNACKFAKMNISDETISELKSLNSISIENPVDLWILS 618

Query: 703 DVHKTIAKVTDDVARRQTFNTAIAAIMELMNKL-----------------TKAPMTEAQD 745
            ++  I+KV+DD+      N  I  ++E+   L                  K     AQ 
Sbjct: 619 KLNNLISKVSDDLG-----NYKINTVVEIQKFLWHEFCDNYIEMVKHRLYNKEESESAQQ 673

Query: 746 RAILDE--ALKAIT---LMLYPITPHICFEMWVALGQSNIDTASWPTYDEAALVEDEKLI 800
             ++ +    K IT    +L P TPH    +       ++ T SWP       V DE+LI
Sbjct: 674 EKLMAQYTLYKVITESVKLLTPFTPHFAEIVGEIYEIDDLHT-SWP-------VSDERLI 725

Query: 801 VLQ 803
            L+
Sbjct: 726 SLE 728



 Score = 43.1 bits (100), Expect = 7e-08
 Identities = 18/51 (35%), Positives = 26/51 (50%)

Query: 174 GCCWRCDTPVEQKEIPQWFIKITAYAQELLDDLDNLDGWPEMVKTMQRNWI 224
           G CWRC TP+E     QWF+ +T    E+ +  + +   PE +K     WI
Sbjct: 339 GSCWRCKTPIEIIVGDQWFVNVTKLLTEVENAANEISWVPEHMKARLMKWI 389