Pairwise Alignments

Query, 858 a.a., leucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 958 a.a., valyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  124 bits (311), Expect = 3e-32
 Identities = 195/919 (21%), Positives = 346/919 (37%), Gaps = 201/919 (21%)

Query: 1   MQEQYNPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGD 60
           M++ Y+PQ IE  + Q+W+    F    D ++  +  +   P  +G LHMGH    TI D
Sbjct: 1   MEKTYDPQSIEQTLYQNWEEKGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMD 60

Query: 61  VVSRFQRLQGKNVLQPIGWDAFGLPAENAAVKNNTAPA-----------------PWTYE 103
            + R+QR++GKN L  +G D  G+  +    +   A                    W  +
Sbjct: 61  TLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLEAEEGKSRHDLGRDVFMEKVWEWKAQ 120

Query: 104 NIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVYKKTSSVNWCPNDQ 163
           +   +  QL+ +G   DW+RE  T      +  QE F +L+   L+Y+    VNW P   
Sbjct: 121 SGGTITKQLRRMGASVDWDRERFTMDEGLSKAVQEVFVRLYEDDLIYRGKRLVNWDPKLH 180

Query: 164 TVLANEQVEDGCCWRCDTPVEQKEIPQWFIKITAYAQELLDDLDNLDGWPEMVKTMQRNW 223
           T +++ +VE+          ++K+   W ++      EL  D  +               
Sbjct: 181 TAISDLEVEN----------KEKQGHMWHLRYPLADGELTADGKDY-------------- 216

Query: 224 IGRSEGVELKFAVKGENTDLEVYTTRPDTLMGVTYVGIAAGHPLATKAAANNPALAAFID 283
                              LEV TTRP+T++G + V +   HP                D
Sbjct: 217 -------------------LEVATTRPETMLGDSAVAV---HP----------------D 238

Query: 284 ECKNTKVAEAEIATMEKKGMATGLTAIHPLNGREVPIYIANFVLMDYGTGAVMAVPAHDQ 343
           +              E+     G   + P+  R +PI   ++V M +GTG V   PAHD 
Sbjct: 239 D--------------ERYQALIGKYILLPIVNRRIPIVADDYVDMAFGTGCVKITPAHDF 284

Query: 344 RDFEFATKYGLDIIPVIKPADGSELDVSEAAYTEKGVLFAS------GEFDGLDFQAAFN 397
            D+E   ++ L +  V+   D +    +E   T+ G +  S        + GLD   A +
Sbjct: 285 NDYEVGKRHKLPMFNVL-TLDAAIRSSAEVVNTD-GTINTSLDGSLPERYAGLDRFKARD 342

Query: 398 AIAAKLEAEGKGKKTVNFRLR-DWG---------VSRQRYWGAPIPMVTT-----EDGQV 442
           AI A+ E  G  +K     L+  +G         +   +++ A  PM  T     E+G +
Sbjct: 343 AIVAEFETLGLLEKIAPHGLKVPYGDRSGVVIEPMLTDQWYVAVAPMAKTAIEAVENGDI 402

Query: 443 HPVPADQLPVI---------------------LPEDVVMDGVTSPIKADKE-WAKTTFNG 480
             VP     +                      +P     +G     + + E  AK   + 
Sbjct: 403 KFVPQQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDTNGKVYVGRTEAEVRAKHDIDD 462

Query: 481 EPALR-ETDTFDTFMESS-WYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLL 538
             ALR + D  DT+  S+ W ++    P      + E    + P D  + G +     ++
Sbjct: 463 AIALRQDEDVLDTWFSSALWTFSTLGWPD-----NVEDLKTFHPTDVLVTGFD-----II 512

Query: 539 YSRFFHKLLRDAGYVKSDE-----PFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVE 593
           +      ++    ++K ++     PFK +   G++  +A     +K  K   +  +    
Sbjct: 513 FFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDEA----GNKMSKSKGNVLDPLDM 568

Query: 594 RDGKGRIVSAVDATGRQVEHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADM 653
            DG          TG  ++     K+ KS     + +  ++ +G D +R  +   +    
Sbjct: 569 IDGIDLETLVEKRTGNMMQPQLAAKIEKSTRK--EFENGIEAHGTDALRFTLAAMASTGR 626

Query: 654 TLEWQESGVEGANRFLRRVWKLVR------EHTELG-QAPALDASALN---ADQKALRRD 703
            + W    ++G   F  ++W   R      E  + G  +P      +    AD+  +  D
Sbjct: 627 DINWDMKRLDGYRSFCNKLWNASRYVLMNTEGQDCGPNSPDYQGGEMELSLADRWII--D 684

Query: 704 VHKTIAKVTDDVARRQTFNTAIAAIMEL--------MNKLTKAPM---TEAQ---DRAIL 749
           +     K  D+      F+ A   + E           +LTK  +   TEAQ    R  L
Sbjct: 685 LFNQTVKTYDEHMASYRFDLAANTLYEFTWNQFCDWYLELTKPVLQNGTEAQMRGTRHTL 744

Query: 750 DEALKAITLMLYPITPHICFEMW------VALGQSNIDTASWPTYDEA-------ALVED 796
              L+A+  +++P+ P+I   +W        +    I  A +P +D A       A +E 
Sbjct: 745 VNVLEAMQRLMHPMMPYITETIWQRVKPLTGVQGDTIMLAPFPAFDAAKVDATAMADLEW 804

Query: 797 EKLIVLQVNGKLRGKLTVA 815
            K +++ V   +R +L +A
Sbjct: 805 VKQVIVAVR-NIRAELNIA 822