Pairwise Alignments

Query, 858 a.a., leucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 859 a.a., leucyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1372 bits (3550), Expect = 0.0
 Identities = 655/860 (76%), Positives = 739/860 (85%), Gaps = 3/860 (0%)

Query: 1   MQEQYNPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGD 60
           MQEQYNP +IE  VQ+HW + KTF V+ED NKEKFYCLSMFPYPSGRLHMGHVRNYTIGD
Sbjct: 1   MQEQYNPSEIEALVQKHWHDTKTFEVTEDQNKEKFYCLSMFPYPSGRLHMGHVRNYTIGD 60

Query: 61  VVSRFQRLQGKNVLQPIGWDAFGLPAENAAVKNNTAPAPWTYENIEYMKNQLKLLGFGYD 120
           VV+RFQRLQGKNVLQPIGWD+FGLPAENAA+ N TAPAPWTY+NIEYMKNQLKLLGFGYD
Sbjct: 61  VVARFQRLQGKNVLQPIGWDSFGLPAENAAINNKTAPAPWTYQNIEYMKNQLKLLGFGYD 120

Query: 121 WNREFATCRPEYYRWEQEFFTKLFAKGLVYKKTSSVNWCPNDQTVLANEQVEDGCCWRCD 180
           W+RE ATC PEYYRWEQ FFTKL+ KGLVYKKT+SVNWCPND+TVLANEQV+DGCCWRCD
Sbjct: 121 WSREIATCTPEYYRWEQWFFTKLYEKGLVYKKTASVNWCPNDETVLANEQVQDGCCWRCD 180

Query: 181 TPVEQKEIPQWFIKITAYAQELLDDLDNLDGWPEMVKTMQRNWIGRSEGVELKFAVKGEN 240
           TPVEQKEIPQWFIKITAYA+ELL+D+D LDGWPE VKTMQRNWIGRSEGVE+ F V G +
Sbjct: 181 TPVEQKEIPQWFIKITAYAEELLNDIDTLDGWPEQVKTMQRNWIGRSEGVEMTFGVAGSD 240

Query: 241 TDLEVYTTRPDTLMGVTYVGIAAGHPLATKAAANNPALAAFIDECKNTKVAEAEIATMEK 300
              ++YTTRPDTLMGVTYV IAAGHPLA  AA  NP LAAFIDECKN+  +EAE+ATMEK
Sbjct: 241 KSFDIYTTRPDTLMGVTYVAIAAGHPLAEIAAQTNPELAAFIDECKNSTTSEAELATMEK 300

Query: 301 KGMATGLTAIHPLNGREVPIYIANFVLMDYGTGAVMAVPAHDQRDFEFATKYGLDIIPVI 360
           +G+ATGL AIHP+ G++VPI+ ANFVLM+YGTGAVM+VP HDQRD+EFA KY L I  VI
Sbjct: 301 RGVATGLYAIHPITGKQVPIWAANFVLMNYGTGAVMSVPGHDQRDYEFAKKYHLPIEAVI 360

Query: 361 KPADGSELDVSEAAYTEKGVLFASGEFDGLDFQAAFNAIAAKLEAEGKGKKTVNFRLRDW 420
           KPA+G +LD+SEAAYTEKG+LF SGEFDGLDF  AFN IA KL AEGKGK+ VN+RLRDW
Sbjct: 361 KPAEG-DLDISEAAYTEKGILFNSGEFDGLDFDGAFNVIANKLVAEGKGKRQVNYRLRDW 419

Query: 421 GVSRQRYWGAPIPMVTTEDGQVHPVPADQLPVILPEDVVMDGVTSPIKADKEWAKTTFNG 480
           GVSRQRYWGAPIPMVT  DG V P P DQLPVILPEDVVMDG+ SPIKADKEWAKT  NG
Sbjct: 420 GVSRQRYWGAPIPMVTLADGTVIPTPEDQLPVILPEDVVMDGIQSPIKADKEWAKTQVNG 479

Query: 481 EPALRETDTFDTFMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYS 540
           + ALRETDTFDTFMESSWYYARYCSPQA+ +LDP KANYWLPVDQYIGGIEHACMHLLY 
Sbjct: 480 QDALRETDTFDTFMESSWYYARYCSPQAEQMLDPTKANYWLPVDQYIGGIEHACMHLLYF 539

Query: 541 RFFHKLLRDAGYVKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEV-KVERDGKGR 599
           RFFHKLLRDAG V ++EP K+LL QGMVLADAFYYTNDKG + WVSP +V   E+D KGR
Sbjct: 540 RFFHKLLRDAGLVNTNEPAKQLLTQGMVLADAFYYTNDKGARVWVSPLDVATTEKDDKGR 599

Query: 600 IVSAVDATGRQVEHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQE 659
           I  A+D  G ++ ++GM KMSKSKNNGIDPQ MV+KYGADTVRLFMMFASP ++TLEWQE
Sbjct: 600 ITKAIDKDGNELVYTGMCKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQE 659

Query: 660 SGVEGANRFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQ 719
           SGVEGA+RF++R+WKL  E+     + ALD S L ++QKALRR+VHKTIAKVTDD+ RRQ
Sbjct: 660 SGVEGAHRFIKRLWKLASEYVAQDNSEALDVSKLTSEQKALRREVHKTIAKVTDDIGRRQ 719

Query: 720 TFNTAIAAIMELMNKLTKAPMTEAQDRAILDEALKAITLMLYPITPHICFEMWVALGQSN 779
            FNTA+AA+MELMN L KAP T  QDRAI+ EAL A+  +LYPI PH+ F +W  LG +N
Sbjct: 720 MFNTAVAAVMELMNHLQKAPQTTGQDRAIIGEALSAVVRLLYPIIPHVSFTLWNELGNTN 779

Query: 780 -IDTASWPTYDEAALVEDEKLIVLQVNGKLRGKLTVAADATQQQVEALGMQDENVQKFID 838
            I+ + WP  DE+ALVED KLIV+QVNGK+R K+TVAADA Q  VEALGM DE V K++D
Sbjct: 780 SIEDSQWPVVDESALVEDSKLIVVQVNGKVRAKITVAADADQASVEALGMADEQVIKYLD 839

Query: 839 GLTVRKVIYVPGKLLNIVAN 858
           G+TVRKVIYVPGKLL+IVAN
Sbjct: 840 GVTVRKVIYVPGKLLSIVAN 859