Pairwise Alignments

Query, 858 a.a., leucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 884 a.a., valyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  136 bits (342), Expect = 6e-36
 Identities = 185/862 (21%), Positives = 304/862 (35%), Gaps = 245/862 (28%)

Query: 5   YNPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSR 64
           Y P+D+E + ++HW++N+TF    D   E +  +   P  +G LH+GH  N+ + DV+ R
Sbjct: 10  YEPRDVEERWRRHWEDNRTFTPDMDAPGEPYSIVIPPPNVTGALHIGHALNHVLIDVLCR 69

Query: 65  FQRLQGKNVLQPIGWDAFGLPAENAAVKNNTAPA----------------PWTYENIEYM 108
             R QGK VL   G D  G+  +N   +                       W  E    +
Sbjct: 70  NARQQGKKVLWLPGTDHAGIATQNVVERALAKEGLSRHDLGREAFIERVWQWKEEYGNRI 129

Query: 109 KNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVYKKTSSVNWCPNDQTVLAN 168
            NQ+++LG   DW RE  T      +  ++ F  L+  G +Y+    +NWC    T LA+
Sbjct: 130 LNQIRMLGDSVDWTRERFTMDEGLSKAVRKVFVDLYNGGYIYRGNYIINWCNRCHTALAD 189

Query: 169 EQVEDGCCWRCDTPVEQKEIPQWFIKITAYAQELLDDLDNLDGWPEMVKTMQRNWIGRSE 228
                                                 D +D  PE           +  
Sbjct: 190 --------------------------------------DEVDHMPE-----------QGH 200

Query: 229 GVELKFAVKGENTDLEVYTTRPDTLMGVTYVGIAAGHPLATKAAANNPALAAFIDECKNT 288
              +++  +  +  + + TTRP+T+M  T V +   HP   + A                
Sbjct: 201 LYHVRYDFEDGSGSVVIATTRPETIMADTGVCV---HPEDERYAG--------------- 242

Query: 289 KVAEAEIATMEKKGMATGLTAIHPLNGREVPIYIANFVLMDYGTGAVMAVPAHDQRDFEF 348
                            G   + P+ GR VP++   +V  ++GTGA+   P HD  D+  
Sbjct: 243 ---------------LIGKKILVPVIGRAVPLFADTYVDREFGTGALKVTPCHDPNDWTL 287

Query: 349 ATKYGLDIIPVIKPADGSELDVSEAAYTEK--------GVLFASGEFDGLD--------- 391
             ++GL  I  I        +    A   K          L ASG+   ++         
Sbjct: 288 GERHGLAFIQCIDEDGNMTAEAGPYAGLTKEECRKRIVADLEASGQLVRVEELNHSVGHC 347

Query: 392 --------------FQAAFNAIAAKLEA----------EGKGKKTVNF--RLRDWGVSRQ 425
                         +  A   +A +  A          E   K   N+   +RDW +SRQ
Sbjct: 348 YRCKTVVEPHMSEQWFVASTKLAPRARAAVPQMTQIFPESWMKTYFNWLDNIRDWCISRQ 407

Query: 426 RYWGAPIPMVTT-EDGQVHPVPADQLPVILPEDVVMDGVTSPIKADKEWAKTTFNGEPAL 484
            +WG  IP  T  + G++  + ++Q P   P+    D    P                  
Sbjct: 408 IWWGHRIPAWTCGKCGKL--IVSEQDPTACPDCGCTDLTQDP------------------ 447

Query: 485 RETDTFDTFMESS-WYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFF 543
              D  DT+  S+ W ++    P     L    A ++ P    + G +      +   + 
Sbjct: 448 ---DVLDTWFSSALWPFSTMGWPDKTKDL----ATFY-PTSVLVTGFD------ILFFWV 493

Query: 544 HKLLRDAGYVKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSA 603
            +++    +   + PFK +    +V                         RDG+GR    
Sbjct: 494 ARMMMLGMHFMDEVPFKHVYLHALV-------------------------RDGEGR---- 524

Query: 604 VDATGRQVEHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVE 663
                         KMSKS  N IDP  M+DKYG D++R  +   +     ++  E  +E
Sbjct: 525 --------------KMSKSTGNVIDPLAMIDKYGTDSLRFTLAAFAAMGRDIKLSEDRIE 570

Query: 664 GANRFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQT--- 720
           G   F+ +VW   R    L   P    +AL+ D   ++   HK I    +++   Q    
Sbjct: 571 GYRHFVNKVWNAAR--FSLMNLPEEAPAALDLDN--VKGMHHKWILHRLEELKASQAAGI 626

Query: 721 ----FNTAIAAI--------MELMNKLTKAPMTEAQDRA-----ILDEALKAITLMLYPI 763
               FN     +         +   +L K  M    +R      +L   L+   L+L+P 
Sbjct: 627 DGYRFNEVAQGLYRFWWNEFCDWYLELIKPDMQAGGERQATAQYVLWTVLREALLLLHPF 686

Query: 764 TPHICFEMWVAL-GQSNIDTAS 784
            P +  E+W AL G +  D A+
Sbjct: 687 MPFVTAEVWQALPGHAGDDIAT 708