Pairwise Alignments

Query, 858 a.a., leucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 879 a.a., valyl-tRNA synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  145 bits (365), Expect = 1e-38
 Identities = 196/888 (22%), Positives = 322/888 (36%), Gaps = 243/888 (27%)

Query: 1   MQEQYNPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGD 60
           +  +YNP D+E K  Q+W  ++ F    D  +E +  +   P  +G LHMGH+ N TI D
Sbjct: 3   LASKYNPADVEGKWYQYWLEHRLFSSKPD-GREPYTIVIPPPNVTGVLHMGHMLNNTIQD 61

Query: 61  VVSRFQRLQGKNVLQPIGWDAFGLPAENAAVKNNTAPA----------------PWTYEN 104
           ++ R  R++GKN     G D   +  E   V    A                   WT E+
Sbjct: 62  ILVRRARMEGKNACWVPGTDHASIATEAKVVNKLAAQGIKKTDLTRDEFLKHAWDWTEEH 121

Query: 105 IEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVYKKTSSVNWCPNDQT 164
              +  QL+ LG   DW+R   T   E  +   + F  L+ KGL+Y+    VNW P   T
Sbjct: 122 GGIILKQLRKLGASCDWDRTAFTMDEERSKSVLKVFVDLYNKGLIYRGVRMVNWDPKALT 181

Query: 165 VLANEQVEDGCCWRCDTPVEQKEIPQWFIKITAYAQELLDDLDNLDGWPEMVKTMQRNWI 224
            L++E+V           + ++E  + F                                
Sbjct: 182 ALSDEEV-----------IYKEEHGKLFY------------------------------- 199

Query: 225 GRSEGVELKFAVKG--ENTDLEVYTTRPDTLMGVTYVGIAAGHPLATKAAANNPALAAFI 282
                  L++ V+G  E     V TTRP+T+MG T + I    P                
Sbjct: 200 -------LRYKVEGDPEGRYAVVATTRPETIMGDTAMCINPNDP---------------- 236

Query: 283 DECKNTKVAEAEIATMEKKGMATGLTAIHPLNGREVPIYIANFVLMDYGTGAVMAVPAHD 342
                            K     G   I PL  R +P+   ++V +++GTG +   PAHD
Sbjct: 237 -----------------KNAWLKGKKVIVPLVNRVIPVIEDDYVDIEFGTGCLKVTPAHD 279

Query: 343 QRDFEFATKYGLDIIPVIKPADGSELDVSEAAYTEKGVLF-ASGEFDGLDFQAAFNAIAA 401
             D+    KY L  I +               + + G L  A+G + G+D       I  
Sbjct: 280 VNDYMLGEKYNLPSIDI---------------FNDNGTLSEAAGLYIGMDRFDVRKQIEK 324

Query: 402 KLEAEGKGKKTVNFRLR-----------------DWGVSRQRYWGAPIPMVTTEDGQVHP 444
            L+A G  +KT  +  +                  W +  Q +    +P V  ++ + +P
Sbjct: 325 DLDAAGLLEKTEAYTNKVGYSERTNVVIEPKLSMQWFLKMQHFADMALPPVMNDELKFYP 384

Query: 445 VP-----------------------ADQLPV-ILPEDVVMDGVT---SPIKADKEWAKTT 477
                                      ++P   LPE   +   T   +  KA ++     
Sbjct: 385 AKYKNTYRHWMENIKDWCISRQLWWGHRIPAYFLPEGGYVVAATPEEALAKAKEKTGNAA 444

Query: 478 FNGEPALRETDTFDTFMESSWYYARYCSPQADDILDP--EKANYWLPVDQYIGGIEHACM 535
              +   ++ D  DT+  SSW +        D I  P  E+ +Y+ P    + G +    
Sbjct: 445 LTMDDLRQDEDCLDTWF-SSWLWP---ISLFDGINHPGNEEISYYYPTSDLVTGPD---- 496

Query: 536 HLLYSRFFHKLLRDAGY-VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVER 594
            +++  F+   +   GY  +   PFK +   G+V                         R
Sbjct: 497 -IIF--FWVARMIMVGYEYEGKMPFKNVYFTGIV-------------------------R 528

Query: 595 DGKGRIVSAVDATGRQVEHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMT 654
           D  GR                  KMSKS  N  DP E++DKYGAD VR+ MM A+PA   
Sbjct: 529 DKLGR------------------KMSKSLGNSPDPLELIDKYGADGVRMGMMLAAPAGND 570

Query: 655 LEWQESGVEGANRFLRRVW---KLVREHTELGQAPALDASALNADQKALRRDVHKTIAKV 711
           + + ++  E    F  ++W   +L++  T      A DA+ L       +++    +A  
Sbjct: 571 ILFDDALCEQGRNFCSKIWNAFRLIKGWTVDDNIQASDAAKLAVHWFESKQN---EVAAE 627

Query: 712 TDDVARRQTFNTAIAAIMELM--------NKLTKAPMTEAQDRAILDEA---LKAITLML 760
             D+  +   + A+ A+ +L          ++ K    +  DR         L  +  +L
Sbjct: 628 VADLFSKYRLSEALMAVYKLFWDEFSSWYLEMIKPAYGQGIDRTTYSATLCFLDNLLHLL 687

Query: 761 YPITPHICFEMWVALGQSN--------IDTASWPTYDEAALVEDEKLI 800
           +P  P I  E+W  + + N        +   S  TY + A V   +++
Sbjct: 688 HPFMPFITEELWQQMYERNAEEGESLMVSALSMDTYVDTAFVAQFEVV 735