Pairwise Alignments

Query, 858 a.a., leucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 944 a.a., leucyl-tRNA synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  521 bits (1342), Expect = e-152
 Identities = 336/963 (34%), Positives = 496/963 (51%), Gaps = 131/963 (13%)

Query: 4   QYNPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGR-LHMGHVRNYTIGDVV 62
           +YN ++IE K QQ W   KT+ V+ED +K+KFY L+MFPYPSG  LH+GH   Y   D+ 
Sbjct: 2   EYNFREIEKKWQQRWVEEKTYQVTEDESKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIY 61

Query: 63  SRFQRLQGKNVLQPIGWDAFGLPAENAAVKNNTAPAPWTYENIEYMKNQLKLLGFG---- 118
           +R++RL+G NVL P+G+DA+GLPAE  A++    PA  T  NI+  + QL  +GF     
Sbjct: 62  ARYKRLRGFNVLNPMGYDAYGLPAEQYAIQTGQHPAITTKANIDRYREQLDKIGFSFDWS 121

Query: 119 ----------YDWNR-EFATCRPEYY---------------------------------- 133
                     Y W +  F      YY                                  
Sbjct: 122 REIRTCEPEYYHWTQWAFQKMFNSYYCNDEQQARPIQELIDAFAIYGNEGLNAACSEELS 181

Query: 134 ----RW----EQEFFTKLFAKGLVYKKTSSVNWCPNDQTVLANEQVEDGCCWRCDTPVEQ 185
                W    E+E    L    + Y   + VNWC    TVLAN++V DG   R   PV Q
Sbjct: 182 FTAKEWKAKSEKEQQEILMNYRIAYLGETMVNWCQALGTVLANDEVIDGVSERGGFPVVQ 241

Query: 186 KEIPQWFIKITAYAQELLDDLDNLDGWPEMVKTMQRNWIGRSEGVELKFAVKGENTDLEV 245
           K++ QW ++++AYAQ LLD LD +D W E +K  Q+NWIGRSEG E++F VK  + +  +
Sbjct: 242 KKMRQWCLRVSAYAQRLLDGLDTID-WTESLKETQKNWIGRSEGAEVQFKVKDSDLEFTI 300

Query: 246 YTTRPDTLMGVTYVGIAAGHPLATKAA--ANNPALAAFIDECKNTKVAEAEIATMEKKGM 303
           +TTR DT+ GVT++ +A    L  +    A    + A++D  K     E  IA     G+
Sbjct: 301 FTTRADTMFGVTFMVLAPESDLVAQLTTPAQKAEVDAYLDRTKKRTERE-RIADRSVTGV 359

Query: 304 ATGLTAIHPLNGREVPIYIANFVLMDYGTGAVMAVPAHDQRDFEFATKYGLDIIPVIKPA 363
            +G  AI+P  G  VPI+I+++VL  YGTGA+MAVPAHD RD+ FA  +GL+I P+++  
Sbjct: 360 FSGSYAINPFTGEAVPIWISDYVLAGYGTGAIMAVPAHDSRDYAFAKHFGLEIRPLVEGC 419

Query: 364 DGSELDVSEAAYTEKGVL----------FASGEFDGLDFQAAFNAIAAKLEAEGKGKKTV 413
           D SE    E+   ++G++          +     +GL  + A       ++    G+  V
Sbjct: 420 DVSE----ESFDAKEGIVCNSPRPDVTPYCDLSLNGLTIKEAIEKTKQYVKEHNLGRVKV 475

Query: 414 NFRLRDWGVSRQRYWGAPIPMVTTEDGQVHPVPADQLPVILPE-DVVMDGVTS--PIKAD 470
           N+RLRD   SRQRYWG P P V  +DG  + +  D LP+ LPE D  +   T   P+   
Sbjct: 476 NYRLRDAIFSRQRYWGEPFP-VYYKDGMPYMIDEDCLPLELPEVDKFLPTETGEPPLGHA 534

Query: 471 KEWAKTTFNGEPALR-----------ETDTFDTFMESSWYYARYCSPQADD-ILDPEKAN 518
           KEWA  T N                 E +T   F  SS YY RY  P  +  ++DP+   
Sbjct: 535 KEWAWDTVNKCTVENEKIDNVTIFPLELNTMPGFAGSSAYYLRYMDPHNNKALVDPKVDE 594

Query: 519 YWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGYVKSDEPFKKLLCQGMVLADAFYYTND 578
           YW  VD Y+GG EHA  HL+YSRF++K L D G    +EPF+KL+ QGM+   + +    
Sbjct: 595 YWKNVDLYVGGTEHATGHLIYSRFWNKFLHDVGASVVEEPFQKLVNQGMIQGRSNFVYRI 654

Query: 579 KGGKEWVS--------PTEVKVERDGKGRIVSAVDA----------------TGRQVEHS 614
           K    +VS         T + V+ +     +  ++A                 G+ +   
Sbjct: 655 KDTHTFVSLNLKDQYEVTPLHVDVNIVSNDILDLEAFKAWRPEYAEAEFILEDGKYICGW 714

Query: 615 GMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEGANRFLRRVWK 674
            + KMSKS  N ++P  +VDKYGADT+R++ MF  P + +  W  +G++G +RF+R+ W 
Sbjct: 715 AVEKMSKSMFNVVNPDMIVDKYGADTLRMYEMFLGPVEQSKPWDTNGIDGVHRFIRKFWS 774

Query: 675 LVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIAAIMELMNK 734
           L    T+  +    D  A   + K+L    HK I KVT D+  + ++NT+++A M  +N+
Sbjct: 775 LFYSRTD--EYLVKDEPATKEELKSL----HKLIKKVTGDI-EQFSYNTSVSAFMICVNE 827

Query: 735 LTKAPMTEAQDRAILDEALKAITLMLYPITPHICFEMWVALG-QSNIDTASWPTYDEAAL 793
           L+     +        E L+ + + L P  PH+C E+W  LG ++++  A+WP Y+E  L
Sbjct: 828 LSNLKCNK-------KEILEQLVITLAPFAPHVCEELWDTLGHETSVCDAAWPAYNEEYL 880

Query: 794 VEDEKLIVLQVNGKLRGKLTVAADATQQQVEALGMQDENVQKFIDGLTVRKVIYVPGKLL 853
            ED     +  NGK R  +   ADA    ++A  + DE  QK+I+G T +K+I VP K++
Sbjct: 881 KEDTINYTISFNGKARFNMEFDADAASDAIQAAVLADERSQKWIEGKTPKKIIVVPKKIV 940

Query: 854 NIV 856
           N+V
Sbjct: 941 NVV 943