Pairwise Alignments

Query, 858 a.a., leucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 959 a.a., valyl-tRNA synthetase from Burkholderia phytofirmans PsJN

 Score =  102 bits (254), Expect = 1e-25
 Identities = 98/424 (23%), Positives = 161/424 (37%), Gaps = 113/424 (26%)

Query: 1   MQEQYNPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGD 60
           + + + P  IE      W+         D N++ F      P  +G LHMGH  N TI D
Sbjct: 12  LAKSFEPHTIEAHWGPEWEKRAYATPVIDENRKDFSIQLPPPNVTGTLHMGHAFNQTIMD 71

Query: 61  VVSRFQRLQGKNVLQPIGWDAFGLPAENAAVKNNTAPA----------------PWTYEN 104
            ++R+ R+ G+N L   G D  G+  +    +   A                   W  E+
Sbjct: 72  GLARYHRMLGENTLWVPGTDHAGIATQIVVERQLDAQGVSRHDLGREKFVERVWEWKQES 131

Query: 105 IEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVYKKTSSVNWCPNDQT 164
              + NQ++ LG   DW+RE+ T   +     ++ F +L+ +GL+Y+    VNW P    
Sbjct: 132 GSTITNQVRRLGASIDWSREYFTMDDKMSAAVRDVFVRLYEQGLIYRGKRLVNWDP---- 187

Query: 165 VLANEQVEDGCCWRCDTPVEQKEIPQWFIKITAYAQ-ELLDDLDNLDGWPEMVKTMQRNW 223
                                       + +TA +  E++ + +N   W           
Sbjct: 188 ----------------------------VLLTAVSDLEVVSEEENGSLW----------- 208

Query: 224 IGRSEGVELKFAVKGENTDLEVYTTRPDTLMGVTYVGIAAGHPLATKAAANNPALAAFID 283
                   +++ +   +  L V TTRP+T++G T V +   HP                 
Sbjct: 209 -------HIQYPLTDGSGHLTVATTRPETMLGDTAVMV---HP----------------- 241

Query: 284 ECKNTKVAEAEIATMEKKGMATGLTAIHPLNGREVPIYIANFVLMDYGTGAVMAVPAHDQ 343
                          E+     G T   PL+GREVPI   ++V  ++GTG V   PAHD 
Sbjct: 242 -------------EDERYAHLIGKTVTLPLSGREVPIIADDYVDREFGTGVVKVTPAHDF 288

Query: 344 RDFEFATKYGLDIIPVIKPADGSELDVSEAAYTEKGVLFASGEFDGLDFQAAFNAIAAKL 403
            D++   ++ L +I ++           +A   +     A  ++ GLD   A   + A L
Sbjct: 289 NDYQVGLRHKLPMIEIL---------TLDAKINDN----APEKYRGLDRFDARKQVVADL 335

Query: 404 EAEG 407
           EA G
Sbjct: 336 EALG 339



 Score = 31.2 bits (69), Expect = 3e-04
 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 417 LRDWGVSRQRYWGAPIPMVTTEDGQVHPVPADQLPVILPEDVVMDGVTSPIKADKEWAKT 476
           ++DW +SRQ +WG  IP    E+G++     ++            G T  ++ D++   T
Sbjct: 419 IQDWCISRQLWWGHQIPAWYGENGEIFVAKTEE---DARAKAAAAGYTGALRRDEDVLDT 475

Query: 477 TFN 479
            F+
Sbjct: 476 WFS 478



 Score = 30.0 bits (66), Expect = 7e-04
 Identities = 13/24 (54%), Positives = 17/24 (70%)

Query: 618 KMSKSKNNGIDPQEMVDKYGADTV 641
           KMSKSK N +DP ++VD  G D +
Sbjct: 548 KMSKSKGNTLDPIDIVDGIGLDAL 571