Pairwise Alignments

Query, 342 a.a., DNA polymerase III subunit delta from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., DNA polymerase III delta subunit (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N2E2

 Score =  169 bits (427), Expect = 1e-46
 Identities = 108/343 (31%), Positives = 175/343 (51%), Gaps = 4/343 (1%)

Query: 1   MRIYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKHRFSADAGLDW 60
           M++   +L + L   L P+Y++ G++PLL QEA  AI   A+ QGF E+  F+ADA  DW
Sbjct: 1   MKLAPAQLGKHLQGALAPVYIISGDDPLLCQEAADAIRSAARQQGFDERQVFAADASFDW 60

Query: 61  NAVYDCCQALSLFSSRQLIEIEIPESGVNAQTAKELSALVGQLHQDILLLVIGPKLTKAQ 120
             +     ++SLF+ ++L+E+ +P      + A  L     +  +D +LL+  PKL  + 
Sbjct: 61  GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALIEYCSRPAEDTVLLISLPKLDGSA 120

Query: 121 ENAAWFKTLAQ--QACWVNCLTPELSRLPQFVQQRCFALGLKPDAEAVQMLAQWHEGNLF 178
           +   W K L +  Q  +V     ++S+LP +++QR    GL    +AV+++A   EGNL 
Sbjct: 121 QKTKWGKALVEGPQTQFVQIWPVDVSQLPSWIRQRLSQAGLSASQDAVELIAARVEGNLL 180

Query: 179 ALAQSLEKLALLYPDGLLTLVRLEESLSRHNHFTPYHWMDALLEGKANRAQRILRQLMLE 238
           A AQ +EKL L+   G +T+  ++ +++    F  +   DA+L G+A  A R+L  L  E
Sbjct: 181 AAAQEIEKLKLMAEGGQITVETVQAAVADSARFDVFGLTDAILNGEAAHALRMLEGLRGE 240

Query: 239 ESEPIILIRTAQKELTQLLKWQQERQQLGNLGSLFDRYR--VWQNRRPLYSAALQRLPSR 296
             EP +++    +EL  L     +  Q   L   F + R  VW  R+PL S ALQR  + 
Sbjct: 241 GVEPPVILWALARELRLLANLSLQYSQGVPLDKAFSQARPPVWDKRKPLMSKALQRYSAS 300

Query: 297 ALLRLVGILTQAELLAKTQYEQPVWPILQQLSLECCNPQANLP 339
              +L+    + +   K Q     W  L +LSL     +  LP
Sbjct: 301 RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMAGQRLALP 343