Pairwise Alignments

Query, 342 a.a., DNA polymerase III subunit delta from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., DNA polymerase III, delta subunit from Pseudomonas stutzeri RCH2

 Score =  153 bits (387), Expect = 5e-42
 Identities = 99/296 (33%), Positives = 155/296 (52%), Gaps = 4/296 (1%)

Query: 1   MRIYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKHRFSADAGLDW 60
           M++   +L + L   L P+Y+V G+E LL QEA  AI    +AQGF E+  F  + G DW
Sbjct: 1   MKLSPAQLGKHLQGPLAPVYVVCGDEHLLCQEACDAIRAATRAQGFSERQVFHVETGFDW 60

Query: 61  NAVYDCCQALSLFSSRQLIEIEIPESGVNAQTAKELSALVGQLHQDILLLVIGPKLTKAQ 120
             + +   +LSLF+ ++L+E+ IP      + A  L   + +  +D +LL+  PKL  + 
Sbjct: 61  GQLIEAGASLSLFAEKRLLELRIPNGKPGDKGAAALLDYLARPAEDTVLLISLPKLDGST 120

Query: 121 ENAAWFKTL--AQQACWVNCLTPELSRLPQFVQQRCFALGLKPDAEAVQMLAQWHEGNLF 178
           +   W K L   +   ++     + ++LPQ+++QR    GL  D EAV+++A   EGNL 
Sbjct: 121 QKTKWAKALIDGKDVQFLQIWPVDAAQLPQWIRQRLAQAGLSADQEAVELIAARVEGNLL 180

Query: 179 ALAQSLEKLALLYPDGLLTLVRLEESLSRHNHFTPYHWMDALLEGKANRAQRILRQLMLE 238
           A AQ +EKL LL   G +T   ++ +++    +  +  +DA L G+A  A  +L  L  E
Sbjct: 181 AAAQEIEKLKLLAEAGQVTADTVQAAVADSARYDVFGLIDATLHGQAAHALHMLEGLRGE 240

Query: 239 ESEPIILIRTAQKELTQLLKWQQERQQLGNLGSLFDRYR--VWQNRRPLYSAALQR 292
             E  +++    +EL  L    Q+  Q   L   F + R  VW  RRPL S ALQR
Sbjct: 241 GVEAPVILWALARELRLLANIAQQYAQGIPLDRAFSQARPPVWDKRRPLISKALQR 296