Pairwise Alignments

Query, 342 a.a., DNA polymerase III subunit delta from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., DNA polymerase III, delta subunit from Pseudomonas syringae pv. syringae B728a

 Score =  174 bits (441), Expect = 3e-48
 Identities = 110/343 (32%), Positives = 178/343 (51%), Gaps = 4/343 (1%)

Query: 1   MRIYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKHRFSADAGLDW 60
           M++   +L + L  TL P+Y++ G++PLL QEA  AI   A+ QGF E+  FSADA  DW
Sbjct: 1   MKLAPAQLGKHLQGTLAPVYVISGDDPLLCQEAADAIRAAARQQGFDERQVFSADASFDW 60

Query: 61  NAVYDCCQALSLFSSRQLIEIEIPESGVNAQTAKELSALVGQLHQDILLLVIGPKLTKAQ 120
             +     ++SLF+ R+L+E+ +P      + A  L     +  +D LLL+  PKL  + 
Sbjct: 61  GTLLQAGASMSLFAERRLLELRLPSGKPGDKGAAALMEYCARPAEDTLLLISLPKLDGSA 120

Query: 121 ENAAWFKTLAQ--QACWVNCLTPELSRLPQFVQQRCFALGLKPDAEAVQMLAQWHEGNLF 178
           +   W K L +  Q  +V     ++ +LPQ+++QR    GL    +AV+++A   EGNL 
Sbjct: 121 QKTKWGKALVEGAQTQFVQIWPVDIGQLPQWIRQRLSQAGLAATQDAVELIAARVEGNLL 180

Query: 179 ALAQSLEKLALLYPDGLLTLVRLEESLSRHNHFTPYHWMDALLEGKANRAQRILRQLMLE 238
           A AQ +EKL L+  +G +T+  ++ +++    F  +   DA+L G+A  A R+L  L  E
Sbjct: 181 AAAQEIEKLKLMAEEGQITVETVQAAVADSARFDVFGLTDAVLNGEAAHALRMLEGLRGE 240

Query: 239 ESEPIILIRTAQKELTQLLKWQQERQQLGNLGSLFDRYR--VWQNRRPLYSAALQRLPSR 296
             E  +++    +EL  L    Q+  Q   L  +F   R  +W  R+PL S ALQR  ++
Sbjct: 241 GVETPVILWALTRELRALANMSQQFSQGVPLDKVFSSARPPIWDKRKPLMSKALQRHSAK 300

Query: 297 ALLRLVGILTQAELLAKTQYEQPVWPILQQLSLECCNPQANLP 339
              +L+    + +   K Q     W  L +L+L     +  LP
Sbjct: 301 RWSQLLMDAQRVDAQIKGQAAGSPWSSLSRLALLMAGQRLALP 343