Pairwise Alignments

Query, 342 a.a., DNA polymerase III subunit delta from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., DNA-directed DNA polymerase (RefSeq) from Shewanella amazonensis SB2B

 Score =  180 bits (457), Expect = 4e-50
 Identities = 110/329 (33%), Positives = 178/329 (54%), Gaps = 2/329 (0%)

Query: 1   MRIYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKHRFSADAGLDW 60
           MR+Y E+L   L   L   Y +FG++  L++ A+T +   A+ QGF E+     D G +W
Sbjct: 1   MRVYPEQLGRHL-TPLAQCYCLFGDDAWLIENARTQLLMAARQQGFEERISLEQDNGFNW 59

Query: 61  NAVYDCCQALSLFSSRQLIEIEIPESGVNAQTAKELSALVGQLHQDILLLVIGPKLTKAQ 120
           N + +  QALSLF+SR++IE+ +P++   A  +  L++L+ Q + D+LL++ GPKL   Q
Sbjct: 60  NDLQNEWQALSLFASRRIIELTLPQAKPGADGSAMLTSLMAQPNPDLLLILRGPKLAAEQ 119

Query: 121 ENAAWFKTLAQQACWVNCLTPELSRLPQFVQQRCFALGLKPDAEAVQMLAQWHEGNLFAL 180
            N+ WFK L     ++ C TPE  +  +++  R  A  L  D +A Q+LA  +EGNL A 
Sbjct: 120 TNSKWFKALDNVGIYLPCNTPEGQQFFRWLDGRIAANRLMLDGDARQLLATLYEGNLLAA 179

Query: 181 AQSLEKLALLYPDGLLTLVRLEESLSRHNHFTPYHWMDALLEGKANRAQRILRQLMLEES 240
            Q+++ LALL  +  ++   L +     + F  +   DALL  +  R   IL QL  E +
Sbjct: 180 EQAVQLLALLAANRRISAEELSQYFDDQSRFNVFQLSDALLGNQQQRVAHILAQLKAEGT 239

Query: 241 EPIILIRTAQKELTQLLKWQQERQQLGNLGSLFDRYRVWQNRRPLYSAALQRLPSRALLR 300
              I++    +EL  LL+ +    Q  +L  ++ + R+W  R+PLY AAL RL    +  
Sbjct: 240 ALPIVLWAVFRELASLLQLKTAMVQRESLAPMWSKLRIWDKRKPLYEAALSRLSLTQIEA 299

Query: 301 LVGILTQAELLAKTQYEQPVWPILQQLSL 329
           ++ + +  EL  K   E+  W +L  L L
Sbjct: 300 MLALSSTLELKLKQGGEED-WTLLTHLCL 327