Pairwise Alignments

Query, 342 a.a., DNA polymerase III subunit delta from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., DNA polymerase III, delta subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  194 bits (492), Expect = 4e-54
 Identities = 123/344 (35%), Positives = 188/344 (54%), Gaps = 7/344 (2%)

Query: 1   MRIYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKHRFSADAGLDW 60
           MR+Y ++L+  L+  L+  YL+FG++P LL+ +K  I + A+ QGF E+ +   + G +W
Sbjct: 1   MRVYPDQLSRHLNP-LHACYLIFGDDPWLLETSKDQIRQAAKRQGFEERVQLIQETGFNW 59

Query: 61  NAVYDCCQALSLFSSRQLIEIEIPESGVNAQTAKELSALVGQLHQDILLLVIGPKLTKAQ 120
             +    Q++SLFSSR++IE+ +P +   A  +  L AL+   + D+LL++ GPKL   Q
Sbjct: 60  GDLTQEWQSMSLFSSRRIIELTLPNAKPGADGSAALQALLQTPNPDVLLILEGPKLASEQ 119

Query: 121 ENAAWFKTLAQQACWVNCLTPELSRLPQFVQQRC--FALGLKPDAEAVQMLAQWHEGNLF 178
            N+ WFKTL     ++ C TPE  +  +++  R   F L L+PDA A  ML   +EGNL 
Sbjct: 120 TNSKWFKTLDSLGIYLPCTTPESDQFRRWLDSRIAHFKLNLQPDARA--MLYTLYEGNLL 177

Query: 179 ALAQSLEKLALLYPDGLLTLVRLEESLSRHNHFTPYHWMDALLEGKANRAQRILRQLMLE 238
           A  Q+++ L LL P   +    L       + FT +   DALL  + + AQ +L QL  E
Sbjct: 178 AADQAMQLLQLLSPSQPIGADELSHYFEDQSRFTVFQLTDALLNNRQDSAQHMLAQLNGE 237

Query: 239 ESEPIILIRTAQKELTQLLKWQQERQQLGNLGSLFDRYRVWQNRRPLYSAALQRLPSRAL 298
            +   IL+    KEL  LL  + E+ Q   L SLF ++R+W  R+PLY  ALQRL    +
Sbjct: 238 GTAMPILLWALFKELQLLLSLKSEQAQGAPLNSLFGKHRIWDKRKPLYQTALQRLSLTQI 297

Query: 299 LRLVGILTQAELLAKTQYEQPVWPILQQLSLECCNPQANLPLPH 342
             ++   ++ EL  K Q     W  L  L L   +P+A+  L H
Sbjct: 298 EHMLAFASKLELNLK-QLGHEDWTGLSHLCL-LFDPKAHGHLAH 339