Pairwise Alignments

Query, 156 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Vibrio cholerae E7946 ATCC 55056

Subject, 156 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 63.2 bits (152), Expect = 2e-15
 Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 13/160 (8%)

Query: 3   IQLIAVGTKMPKWVEEGFQEYRRRFPHDMPLELVEITAG-----KRGKNADIARILQKEG 57
           ++++AVG     + ++    Y  R  H+  L    +  G        +NAD       EG
Sbjct: 4   LRILAVGRIRTPFWQQAATHYMERIRHNCRLTETVVKDGGAALPPTARNAD-------EG 56

Query: 58  EAMLAAVPKGNRIVTLDIPGKRWDTEELAVQLESWKLDG-RDVSILIGGPEGLAPACKAA 116
             ++AA+   + +V LD  G+   + + A  +E    +  R    +IGG  GL  +    
Sbjct: 57  ARLIAAMGPTDIVVCLDEHGRNMTSRDFAGFIERLTENATRTPCFVIGGAFGLDKSVLQR 116

Query: 117 ADQSWSLSPLTLPHPLVRVVMAESLYRAWSITTNHPYHRE 156
           A+   +L P+T PH + RVV+ E LYRA +I    PYH +
Sbjct: 117 AEHKLALGPMTFPHEMARVVLLEQLYRADAILRGAPYHHD 156