Pairwise Alignments

Query, 156 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Vibrio cholerae E7946 ATCC 55056

Subject, 173 a.a., rRNA large subunit methyltransferase from Caulobacter crescentus NA1000

 Score = 76.6 bits (187), Expect = 2e-19
 Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 18/164 (10%)

Query: 1   MKIQLIAVGTKMPKWVEEGFQ-EYRRRFPHDM------PLELVEITAGKRGKNADIARIL 53
           MKI ++ VG K+ + VE     +Y  R           P++++E+ A K GK A+ A +L
Sbjct: 20  MKITILTVG-KLGRMVEAQLALDYASRATASGRALALGPVDILEVEARKPGKAAE-AEVL 77

Query: 54  QKEGEAMLAAVPKGNRIVTLDIPGKRWDTEELAVQLESWKLDG-RDVSILIGGPEGLAPA 112
           +   E        G  +V  D  GK W +   A  L   + DG R V  LIGG +GL P+
Sbjct: 78  RPHLE--------GAYVVACDEHGKAWKSRAFADHLARLRDDGNRRVVFLIGGADGLDPS 129

Query: 113 CKAAADQSWSLSPLTLPHPLVRVVMAESLYRAWSITTNHPYHRE 156
             AAA+++ +    T PH L R ++AE +YRA +I +  PYHR+
Sbjct: 130 ILAAANETMAFGVQTWPHALARAMLAEQIYRAATILSGSPYHRD 173