Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., Penicillin-binding protein 2 (PBP-2) from Pseudomonas fluorescens FW300-N2E2

 Score =  565 bits (1457), Expect = e-165
 Identities = 287/614 (46%), Positives = 406/614 (66%), Gaps = 13/614 (2%)

Query: 8   IRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAP 67
           I+DH+ +  L R R +   + ++  + +L+  LY +Q+ QY+ + T S +NR+ V PI P
Sbjct: 7   IKDHEKDARLVRGRVVFGAIMVVTLICVLIARLYFLQVIQYEYHSTLSENNRVHVQPIPP 66

Query: 68  NRGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFEKERKQT 127
            RGLIFDRNGV++A+NRP F+L +  E+  + +  +  + ++++++PE  A FEK  +Q 
Sbjct: 67  TRGLIFDRNGVVVADNRPSFSLSMTRERSGDWQHVLDVIVEVLQLTPEDRAIFEKRMRQG 126

Query: 128 RR-FNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDK 186
           RR F  VP+L +LT++++A  +VNQ + PGV V A L R+YP G    H +GY+ RIN+K
Sbjct: 127 RRPFEPVPILFELTEEQIALIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYMGRINEK 186

Query: 187 DLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPPI 246
           +L+ LD      NY  T  IGK GIER+YE  LHG  GY+EVE N+RGRV+R LK   PI
Sbjct: 187 ELKTLDP----VNYSGTHHIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTDPI 242

Query: 247 PGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGKA 306
           PGKDIVL+LDI+LQ  A   L GRRG++VALDP    VLAM S PS+DPN FV GIS KA
Sbjct: 243 PGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPNTGEVLAMVSQPSFDPNLFVTGISFKA 302

Query: 307 YSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRIPNTDT 366
           Y++L +   RPL NR   G+YPPGST+KP +A++ L  G++T ++   DPGY+++PN D 
Sbjct: 303 YAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVTASSRVYDPGYYQLPNYDH 362

Query: 367 RPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGIDIYEE 426
           + +R+W R G G VD+  ++  S DT+FY +A+ +GID+LSS+M +FG G    +D++EE
Sbjct: 363 K-YRNWNRTGDGYVDLETAIMRSNDTYFYDLAHKLGIDRLSSYMNKFGLGQKVSLDMFEE 421

Query: 427 SKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIAPHLL 486
           S   MP+REWK A  +  W+ G+T+ +GIGQGY  ATP+Q+A+AT+++ + GK   PHL 
Sbjct: 422 SPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALVASKGKWYRPHLA 481

Query: 487 RATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAFQNMPYE 546
           + TI+       QK  +    P I       W    +GM  V HGA+GTAR+A     Y 
Sbjct: 482 K-TIEG------QKPVDPDPMPDIILRNPSDWQKVNNGMQQVMHGARGTARKASIGAQYR 534

Query: 547 SAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENGGGGSSN 606
            AGKSGTAQV  + +G+KY+ S++ E   DHALF GFAP  +PK++V+ ++ENG  GS  
Sbjct: 535 IAGKSGTAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPADNPKIVVSVMVENGESGSGV 594

Query: 607 GAPVVRQIFDHVIL 620
            APVVRQI D  +L
Sbjct: 595 AAPVVRQIMDAWLL 608