Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., penicillin-binding protein 2 from Pseudomonas fluorescens FW300-N2E3

 Score =  509 bits (1311), Expect = e-148
 Identities = 262/617 (42%), Positives = 380/617 (61%), Gaps = 13/617 (2%)

Query: 7   PIRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIA 66
           PI+DH+ ET L   R +   + ++     LV  +Y +Q+ ++  + T S +NR+ V+PI 
Sbjct: 6   PIKDHEKETRLVNKRLLACALFVVAITCALVVRMYVLQVVEFDYHSTISENNRVHVLPIT 65

Query: 67  PNRGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFEKERKQ 126
           P RGLI+DRNGVLLA+NRP +NL +  E+  +++  +  +  L+ +  E  A F+K  KQ
Sbjct: 66  PTRGLIYDRNGVLLADNRPSYNLIITRERATDVKGELDSVVNLLHLPAEDRALFDKAMKQ 125

Query: 127 TRR-FNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRIND 185
            R  F  V L  +LT++++A  +VN+ + PG+ V     R YP G    H IGYV RIN+
Sbjct: 126 ARHPFVPVTLFYELTEEQIATLAVNEFRLPGIDVEPQFVRNYPLGAHFAHSIGYVGRINE 185

Query: 186 KDLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPP 245
           K+ + LD       Y+ T+ IGK GIE++YE  LHG  GY+EVE N++GRV+R LK+  P
Sbjct: 186 KESKALDT----VEYRGTQSIGKTGIEKFYESELHGHVGYEEVETNAQGRVLRVLKHTDP 241

Query: 246 IPGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGK 305
           IPGK+IVL+LD++LQ  A   L  RRGS+VALDP    VLAM S PS+DPN FV GIS K
Sbjct: 242 IPGKNIVLSLDVKLQEAAEDALGDRRGSVVALDPATGEVLAMVSKPSFDPNLFVTGISFK 301

Query: 306 AYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRIPNTD 365
            Y+ L +   RPL NR   G+Y PGST+KP +A++ L  G++T +T   DPGY+++P+ D
Sbjct: 302 EYAALHDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDTGVVTASTRVFDPGYYQLPDFD 361

Query: 366 TRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGIDIYE 425
            + +R+W   G G VD+  ++  S DT+FY +A+ +GID+L  +M  FG G+   +D++E
Sbjct: 362 HK-YRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYMAMFGLGEKVSLDMFE 420

Query: 426 ESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIAPHL 485
           ES   MP++ WK A  + PW+ G+T+ +GIGQGY   TP+Q+A+AT+++ N G    PHL
Sbjct: 421 ESPGLMPSQAWKRATRRQPWFPGETVILGIGQGYMQVTPLQLAQATALIANKGVWNRPHL 480

Query: 486 LRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAFQNMPY 545
            + TID                 P D      W+   HGM +V H  +G AR A     Y
Sbjct: 481 AK-TIDGVAPVDEHPMPNILLKNPHD------WEQVNHGMQMVMHDPRGIARAAAVGAQY 533

Query: 546 ESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENGGGGSS 605
             AGKSGTAQV  + +G++Y+  +  E   D+ALF GFAP + P+++++ ++ENG  G  
Sbjct: 534 RIAGKSGTAQVVAIKQGERYDRLKTRERNRDNALFVGFAPAEHPQIVISVMIENGEAGGR 593

Query: 606 NGAPVVRQIFDHVILGK 622
              PVVRQI D  +L K
Sbjct: 594 VAGPVVRQIMDAWLLDK 610