Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 686 a.a., Penicillin-binding protein 2 (PBP-2) from Xanthomonas campestris pv. campestris strain 8004

 Score =  430 bits (1105), Expect = e-124
 Identities = 244/623 (39%), Positives = 350/623 (56%), Gaps = 23/623 (3%)

Query: 9   RDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAPN 68
           ++  AE   FR RA++ FV +++C+  L    + +Q+  ++ Y TRS  NRIK  P+ P 
Sbjct: 8   KNPHAEAEQFRRRAVLGFVMVVLCLVGLGGWYFKLQVLDHEVYATRSEANRIKPRPVVPG 67

Query: 69  RGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFEKERKQTR 128
           RG+I+DR+G LLAEN P F L+V P+KV NME  +A L ++I I+PE L  F +ERK  R
Sbjct: 68  RGMIYDRSGRLLAENVPAFRLDVTPDKVENMETMLAALGKVIPIAPEDLERFNRERKARR 127

Query: 129 RFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKDL 188
            F    L  +++D+E+A+F+V + +FPGV +   L R YPYG +  H+IGYV RI++KDL
Sbjct: 128 SFLPGTLKLRMSDEEMARFAVERWRFPGVELEPYLTRRYPYGPLFAHIIGYVGRIDEKDL 187

Query: 189 ERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPPIPG 248
             L  EG      A   +GK G+ERYYE  L G  GY++VE N +GR IRT+  V P  G
Sbjct: 188 AVLG-EGN----AALTHMGKSGLERYYEQDLRGQVGYEQVETNVQGRAIRTVGRVAPQSG 242

Query: 249 KDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGKAYS 308
            D+ L++D +LQ           G+ +A+DP+   +L M S PSYDPN FV+GIS   + 
Sbjct: 243 ADLRLSVDADLQRAMVAAFGEHEGAAIAMDPRTGEILGMVSLPSYDPNLFVNGISHTDFK 302

Query: 309 DLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRIPNTDTRP 368
            L ++  RP  NR  LG   PGST+KP IA++ L  G+  P       G + +P   +R 
Sbjct: 303 ALNDNPSRPQFNRLVLGGVAPGSTLKPLIALAGLDSGLRRPEDRVLSTGMFYLPGV-SRG 361

Query: 369 FRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGIDIYEESK 428
           + D  R GHG  D+ KS+ +SV+T++Y++A DMGID+   +M  +GFG  TG+D+  E  
Sbjct: 362 WGDSHRGGHGWTDLRKSIAQSVNTYYYRLAVDMGIDRFDHYMGEYGFGQPTGVDLLGEIG 421

Query: 429 ANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIAPHLLRA 488
             +P+  +K    K  WY GDT+ + IGQG W  TP+Q+ +  S +   G ++ PHL+  
Sbjct: 422 GILPSPAYKYKTRKERWYPGDTVNIAIGQGDWKVTPLQLVRGVSAIAG-GLLLRPHLV-- 478

Query: 489 TIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAK------GTARRAFQN 542
                     +   ++   P I    K     A H + +V  G        GT       
Sbjct: 479 -------LEERTGFDHPWQPMIQPPGKPISANAAH-LQVVREGMMDTMRPGGTGYAITPG 530

Query: 543 MPYESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENGGG 602
            PY+ AGK+GTAQV         +   L  HL    LF GFAP  +P + V   +E GG 
Sbjct: 531 APYQMAGKTGTAQVVSRRGVAAVDPRSLPLHLRHRGLFVGFAPADNPVIAVAVAVEGGGF 590

Query: 603 GSSNGAPVVRQIFDHVILGKKEE 625
           G+S+ AP+ R+IFD  +LGK  E
Sbjct: 591 GTSSAAPIARKIFDAWLLGKLPE 613