Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., penicillin-binding protein 2 from Synechocystis sp000284455 PCC 6803

 Score =  144 bits (362), Expect = 1e-38
 Identities = 151/621 (24%), Positives = 261/621 (42%), Gaps = 103/621 (16%)

Query: 29  ILICMGLLVTNLYNIQI---NQYQDYKTRSNDNRIKVVPIAPNRGLIFDRNGVLLAENRP 85
           + + MG L   LY +Q+   NQ Q          ++  P  P R ++ D  G +LA +R 
Sbjct: 49  LFVAMGGLAYRLYRLQVVEANQLQRMAKAQQSTSMQ--PYVPRRSIV-DSQGNVLATDRL 105

Query: 86  VFNLEVIP------EKVPNMEETIARLQQLI--EISPEKLAAFEKERKQTRRFNSVPLLT 137
            + L V P      +++ +  + IAR    I  +I+P +L    KE++     + + L T
Sbjct: 106 TYTLFVHPRYFEATKEITDPTDYIARELSAILGDITPAQLKEKFKEKE-----SGIKLAT 160

Query: 138 QLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKDLERLDKEGKK 197
            L + +  +  +   +  GV +     RYYP  E+   V+GYV           D E + 
Sbjct: 161 GLNESQAVR--IGSLRMGGVDLEKQYSRYYPQDEMAADVVGYV-----------DGEHQ- 206

Query: 198 ANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPPIPGKD--IVLNL 255
                    G+ G+E    ++L        +    +G V+        +   D  + L +
Sbjct: 207 ---------GQAGLELSQREILEREVETYAIRRTGKGVVLPDSLPDNLLQSNDWQVQLTI 257

Query: 256 DIELQLYAYKLLEG-------RRGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGKAYS 308
           D+ LQ  A +LL+        +RG+++ +D +D  +LAM + P+++PN +          
Sbjct: 258 DMRLQRAARELLKAQVAQQKAKRGTVLVMDAQDGAILAMVNEPTFNPNEYYKA------- 310

Query: 309 DLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGY-----WRIPN 363
                K     N +   +Y PGST KP I   A+ +G++ P    ND G      W I N
Sbjct: 311 -----KVEYFKNWSVSDLYEPGSTFKPVIVALAMNEGVLKPEDRINDSGSVRVGPWTISN 365

Query: 364 TDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGIDI 423
                     + G G ++I + L  S +     IA  +  ++    +   G    TGID+
Sbjct: 366 AS--------KSGAGMINITQVLRYSSNVAMVAIARRLKPERYYELLQGVGLDSRTGIDL 417

Query: 424 YEESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIAP 483
             E+ + +  R+  M     P  Q  T     GQG  + TP+++ +  ++L N GK++ P
Sbjct: 418 PGEAASYLKPRQSFM---DDPIEQATT---SFGQGL-SLTPIKLLQLNAMLANGGKLVTP 470

Query: 484 HLLRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAFQNM 543
           H+++  +D       Q +     +P    V  +     +  M  V  G  GT + A   +
Sbjct: 471 HVVKGLVDARNHLHWQPD-----HPVKQVVKPEVAHSVVQMMESVVSGDGGTGKAAL--I 523

Query: 544 P-YESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENGGG 602
           P Y   GK+GTAQ  G   G   NA   +        F    PV +P+ +V  +++   G
Sbjct: 524 PGYRVGGKTGTAQKAGPRGGYLANAKITS--------FVSILPVDNPRYVVVAIIDEPKG 575

Query: 603 GSSNG----APVVRQIFDHVI 619
            ++ G    APVV+ + + +I
Sbjct: 576 ANAYGGTVAAPVVKNVMEALI 596