Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., peptidoglycan glycosyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  662 bits (1709), Expect = 0.0
 Identities = 320/614 (52%), Positives = 434/614 (70%), Gaps = 13/614 (2%)

Query: 8   IRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAP 67
           + DH AE  LF+ RAI +F+ ++   G+L+TNLY++Q+  Y DY TRSNDNRI+V P+AP
Sbjct: 1   MHDHAAEAALFKRRAIFTFLCVVALFGVLLTNLYHLQVTSYADYTTRSNDNRIRVTPVAP 60

Query: 68  NRGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFEKERKQT 127
           +RGLI+DRNGVLLAEN+PV++LE+IPEKV N+ +T+ +L  +I +S E  A F +  K  
Sbjct: 61  SRGLIYDRNGVLLAENQPVYSLELIPEKVKNIPQTLTQLSTVIPLSEEAQAEFLEALKYH 120

Query: 128 RRFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKD 187
           RRF  + L   LT++EVA FSVNQH+FPGV V A LKR+YP+GE+LTHV+G+V +IN KD
Sbjct: 121 RRFKPLTLRDNLTEEEVAAFSVNQHQFPGVRVEAGLKRFYPHGELLTHVLGFVGKINAKD 180

Query: 188 LERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPPIP 247
              L+K  +  +Y A++DIGK G+E+YYE+LLHG  G+ E EVN+RGR IRTLK VPP P
Sbjct: 181 RTALEKADRWPDYAASKDIGKQGVEKYYENLLHGKPGHLEEEVNNRGRTIRTLKTVPPEP 240

Query: 248 GKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGKAY 307
           G+D+ L LDI LQ  A +LL GRRG+IVA+DP+D G++AM SSPSYDPN FV GIS K Y
Sbjct: 241 GQDLYLTLDINLQKKAMELLSGRRGTIVAIDPRDGGIMAMVSSPSYDPNLFVQGISSKDY 300

Query: 308 SDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRIPNTDTR 367
           S LLNDK RPL+NR T G+Y P ST+KP +A+  L++ ++T  T   DPGYW++P  + R
Sbjct: 301 SALLNDKARPLINRATQGLYAPASTIKPHMALMGLEEQVVTERTRIWDPGYWQMPGVE-R 359

Query: 368 PFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGIDIYEES 427
            +RDW +WGHG VD+  ++ ES D FFY + + MGIDK++++M +FGFG+ TG+DI+EES
Sbjct: 360 KWRDWKKWGHGYVDVYHAIVESCDIFFYDMVHKMGIDKIAAFMHQFGFGESTGVDIFEES 419

Query: 428 KANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIAPHLLR 487
              MP+ +WK  RH  PWY GDTI VGIGQGYWTATP+Q+A AT++L N GK   PHLL+
Sbjct: 420 AGIMPSSDWKRIRHNQPWYPGDTISVGIGQGYWTATPIQLANATAILANRGKRFVPHLLK 479

Query: 488 ATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRA-FQNMPYE 546
           A  DN  +     E      PP+     + W+       ++N   + TA ++ F +  Y 
Sbjct: 480 AMKDNSAKIERPPE----EMPPVALKNPRNWE-------IINEAMRQTAHKSRFTDATYT 528

Query: 547 SAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENGGGGSSN 606
           +A K+GTAQVF +A+  KY+  ++AEHL D+AL   +AP + PK+++  VLEN G G +N
Sbjct: 529 AAMKTGTAQVFSVAQDAKYDHDKVAEHLRDNALIVAYAPFESPKIVLAVVLENAGWGGAN 588

Query: 607 GAPVVRQIFDHVIL 620
             PV R + D  +L
Sbjct: 589 AGPVARAMLDEFML 602