Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Peptidoglycan glycosyltransferase (NCBI) from Rhodospirillum rubrum S1H

 Score =  339 bits (869), Expect = 3e-97
 Identities = 211/645 (32%), Positives = 333/645 (51%), Gaps = 36/645 (5%)

Query: 17  LFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAPNRGLIFDRN 76
           LF  RA++        +G L   +Y +Q+ +   Y T + +NR  +  + P RG I DR 
Sbjct: 10  LFTRRAVLLGGAQAGLVGALAARMYYLQVIESDRYLTLAEENRFNLRLLPPPRGHIVDRF 69

Query: 77  GVLLAENRPVFNLEVIPEKVPN-----------MEETIARLQQLIEISPEKLAAFEKERK 125
           G  LA NR  + + +I E +             ++ T+  L +++ +S        ++ K
Sbjct: 70  GDQLAVNRQNYRVSIIAEDILRQVRTAEERQLAIDATLDALGKIVPLSDYDRTRVLRDMK 129

Query: 126 QTRRFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRIND 185
           + R F  V +   LT +E+A   V++   PG+++   L R+YPYG++  H++GYVS +++
Sbjct: 130 RRRSFVPVTIRENLTWEEMAAIEVHKLDLPGITIDEGLSRHYPYGDLAAHLLGYVSSVSE 189

Query: 186 KDLER---LDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKY 242
           +++     L+  G +        IGK G+E+ Y+  L G  G   VEVN+ GRV+     
Sbjct: 190 EEVTGDPLLELPGFR--------IGKQGVEKVYDLALRGHGGTSRVEVNALGRVMDEQTT 241

Query: 243 VPPIPGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGI 302
                G ++ L +D+ LQ +A + L     S V +D     +L+M S P+YDPNAF  G+
Sbjct: 242 EDASAGAELPLTIDMRLQSFASRRLASESASAVIIDIHTGDILSMVSMPAYDPNAFTRGL 301

Query: 303 SGKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRIP 362
           S   + DL+ + R PL N+   G Y PGST K  +A++AL+ G+I  + T   PG+  + 
Sbjct: 302 SSAEWQDLVRNPRSPLTNKAIAGQYSPGSTFKMVVALAALEGGVIKADQTVFCPGHMELG 361

Query: 363 NTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGID 422
                 F  W + GHG ++++ +L ES D +FY++A   GID+++    RFG G++  + 
Sbjct: 362 G---HRFHCWKKGGHGSLNLVGALAESCDVYFYELARRCGIDRIAEMARRFGIGEILDVG 418

Query: 423 IYEESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIA 482
           +  E    MPTR WK A     W+QG+T+  GIGQGY   TP+Q+A  T+ + N G  I 
Sbjct: 419 LPGERSGLMPTRAWKAATLGEGWHQGETLLAGIGQGYVLTTPLQLAVMTARIANGGLKIM 478

Query: 483 PHLLR-ATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAFQ 541
           P L R A   +   F      E    PP+ GV K + D    GM+ V +G +GTARRA  
Sbjct: 479 PRLSRFAAKPDSPGFLAASAQEVPAVPPL-GVAKAHLDAVRRGMWAVVNGDRGTARRA-A 536

Query: 542 NMP---YESAGKSGTAQVFGLAEGQKYNA----SELAEHLHDHALFTGFAPVKDPKVIVT 594
            +P   +E +GK+GT QV  ++  ++        +L   L +HALF  +AP   P+  V 
Sbjct: 537 GIPVAGWEMSGKTGTTQVRRISMRERETGIRREDQLPWELRNHALFVCYAPEDAPRYAVA 596

Query: 595 FVLENGGGGSSNGAPVVRQI-FDHVILGKKEEEPKAESKEEVIQP 638
             +E+GGGGSS   P+ R I  + + L    + P  E K   + P
Sbjct: 597 LCVEHGGGGSSAAGPIARDIMLETLRLDPARKRPGEEIKMADLPP 641