Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., penicillin-binding protein 2 from Phaeobacter inhibens DSM 17395

 Score =  358 bits (919), Expect = e-103
 Identities = 220/612 (35%), Positives = 326/612 (53%), Gaps = 19/612 (3%)

Query: 8   IRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAP 67
           ++D +A       RA++     L   G L   + ++Q++Q   ++  + +NRI +  I P
Sbjct: 5   VKDVEASHRKLSRRALLLGGLQLAFAGGLAMRMRHLQVDQADQFRLLAEENRINLRLIPP 64

Query: 68  NRGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFEKERKQT 127
            RG I+DRNG +LA+N   + + V+PE   ++ + I +L +L+ + PE +     E +++
Sbjct: 65  ARGQIYDRNGTILAQNAQSYRITVVPEDAGDVGDVIGKLSRLLTLDPEDIERAMAEMRRS 124

Query: 128 RRFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKD 187
             F  + L  Q++ D+++K +VN    PG++    L R YP  E   HV+GYV  ++D D
Sbjct: 125 PPFLPITLADQISWDDISKVAVNAPALPGITPEVGLTRVYPQQEDFAHVVGYVGPVSDYD 184

Query: 188 LERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPPIP 247
           L +++ + +         IGK+G E   ED+L G AG + VEVN+ GRV+R L       
Sbjct: 185 LSKME-DPEPVLMIPRFQIGKVGFEAKREDVLRGKAGAKRVEVNATGRVMRELDRREGEA 243

Query: 248 GKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGKAY 307
           G D+ L +D +LQ Y    L     S V +D +   V A+ASSPS+DPN FV GIS   Y
Sbjct: 244 GADMQLTVDADLQYYTQARLGKESASAVVIDCESGDVRAIASSPSFDPNLFVRGISVADY 303

Query: 308 SDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRIPNTDTR 367
             L  D  RPL N++  G YPPGST K   A++AL++G+I    T   PG+  +     R
Sbjct: 304 RMLTEDPYRPLANKSVQGTYPPGSTFKMITALAALEEGLIGTEDTVWCPGHLEVSG---R 360

Query: 368 PFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGIDIYEES 427
            F  W R GHG VD+  SL+ S D ++Y +A  +GIDK+S+   RFG G    + +   +
Sbjct: 361 RFHCWKRAGHGHVDLNTSLKSSCDVYYYDLAIKVGIDKISAMAKRFGLGVRHDLPMSAVA 420

Query: 428 KANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIAPHLLR 487
           K   P +EWK   +   W  GDT+   IGQGY  A+PMQ+A  T+ L   G+ + P LL+
Sbjct: 421 KGIAPNKEWKSRTYGQDWLVGDTVNSSIGQGYLLASPMQLAVMTARLAT-GRSVTPRLLK 479

Query: 488 ATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRA-FQNMPYE 546
            +ID  EQ S   E       PI GV +        GMY V++  +GT  R+        
Sbjct: 480 -SIDGVEQPSGAGE-------PI-GVNENNLRTIRRGMYSVSNERRGTGYRSRIIADGMR 530

Query: 547 SAGKSGTAQVFGLAEGQK----YNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENGGG 602
            AGKSGT+QV  +   ++        +L     DHALF  +AP  DPK  V  V+E+GGG
Sbjct: 531 MAGKSGTSQVRNITAAERAAGVIRNEDLPWERRDHALFVAYAPADDPKFAVAVVVEHGGG 590

Query: 603 GSSNGAPVVRQI 614
           GS   AP+ R +
Sbjct: 591 GSKAAAPIARDV 602