Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., peptidoglycan glycosyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  647 bits (1670), Expect = 0.0
 Identities = 312/619 (50%), Positives = 436/619 (70%), Gaps = 13/619 (2%)

Query: 3   RQHTPIRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKV 62
           R+   + DH AE  LF+ RAI +F  +++ + +L+ NLY++Q+  Y+DY+TRSNDNRI+V
Sbjct: 4   RKRMAMHDHAAEASLFKRRAIFTFACVVVLLSILLGNLYHLQVLSYKDYETRSNDNRIRV 63

Query: 63  VPIAPNRGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFEK 122
           VP+AP+RGLI+DR+G LLAEN+P ++LE+IPEKV ++  T+  L +++E+S +   +   
Sbjct: 64  VPVAPSRGLIYDRHGQLLAENQPFYSLELIPEKVKDVPATLDELAKVVELSKDDRESLVA 123

Query: 123 ERKQTRRFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSR 182
             K  RRF  + +  +L+++EVA FSVNQH+FPG S+ A LKR+YPY  +LTHV+GYV R
Sbjct: 124 SLKYHRRFKPITVKNRLSEEEVAIFSVNQHRFPGFSIDAGLKRHYPYDGLLTHVLGYVGR 183

Query: 183 INDKDLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKY 242
           IN++D   L + G+  NY AT+DIGK GIE++YE LLHG  G+ E EVN+RGR IRTLK 
Sbjct: 184 INNRDQAALQRNGQWQNYAATKDIGKQGIEKFYESLLHGMPGHLEEEVNNRGRTIRTLKS 243

Query: 243 VPPIPGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGI 302
           V P PG+DI L LD++LQ  A +LL GRRGSIVA+DP+D G+LAM SSPSYDPN FVHGI
Sbjct: 244 VAPEPGQDIYLTLDLQLQKKAMELLAGRRGSIVAIDPRDGGILAMVSSPSYDPNQFVHGI 303

Query: 303 SGKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRIP 362
           S KAYSDLLN + RPL+NR T G Y P STVKP +A+  L++ ++TP T   DPG+W+IP
Sbjct: 304 SSKAYSDLLNARSRPLINRATQGQYAPASTVKPHMALLGLEEKVVTPKTRVWDPGFWQIP 363

Query: 363 NTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGID 422
             + R +RDW RWGHG VD+  +L  S DT+FY +AY  GIDK+S++M +FGFG+ TG+D
Sbjct: 364 GVE-RKYRDWKRWGHGWVDVNGALVHSCDTYFYDMAYKTGIDKISNFMQQFGFGERTGVD 422

Query: 423 IYEESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIA 482
           I+EES  NMP+++WK  ++  PWY GDTI VGIGQGYWT TP+Q+A AT+++ N G+   
Sbjct: 423 IFEESAGNMPSKDWKRLKYNQPWYIGDTISVGIGQGYWTTTPLQLANATAIMANKGERFV 482

Query: 483 PHLLRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRA-FQ 541
           PHLL++  ++  +  T          P+D +       + H   ++N   + TA ++ F 
Sbjct: 483 PHLLKSIKNDTVKVDT----------PVDKMAPVVL-KSPHNWQIINEAMRDTAHKSRFV 531

Query: 542 NMPYESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENGG 601
           +  Y +A K+GTAQVF +AE +KY+A  + EHL D+AL   +AP + P++++  VLEN G
Sbjct: 532 DAGYTAAMKTGTAQVFSVAEDEKYDAENIDEHLRDNALIVAYAPYEAPRIVLAVVLENAG 591

Query: 602 GGSSNGAPVVRQIFDHVIL 620
            G +N  PV R + D  +L
Sbjct: 592 WGGANAGPVARALLDEYML 610