Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., penicillin-binding protein 2 from Dechlorosoma suillum PS

 Score =  514 bits (1323), Expect = e-150
 Identities = 266/635 (41%), Positives = 389/635 (61%), Gaps = 14/635 (2%)

Query: 4   QHTPIRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVV 63
           ++T +     E   FR R   +   +L+C  +L    + +Q+ ++  Y TR+ +NRI +V
Sbjct: 2   RYTDLSSSDREQEQFRFRLGFAAGMVLLCFVILFARFFWLQVVKHDYYSTRAEENRISLV 61

Query: 64  PIAPNRGLIFDRNGVLLAENRPVFNLEVIPEKVP-NMEETIARLQQLIEISPEKLAAFEK 122
           PI PNRGLI DRNGV++A N   F LE+ P ++  ++E  I ++  LI I+P+    F+K
Sbjct: 62  PIIPNRGLIVDRNGVVMARNYSAFTLEITPSRLQEDLETVIEQIGTLIPITPKDRKRFKK 121

Query: 123 ERKQTRRFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSR 182
             ++++ F S+P+ T+L+DDEVA+F+ N+++FPGV V A L R YP G+V +H +GY+ R
Sbjct: 122 LMEESKNFESIPIRTRLSDDEVARFAANRYRFPGVEVKARLFRQYPLGDVASHALGYMGR 181

Query: 183 INDKDLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKY 242
           INDKDLE +D   +  NY+ T  IGK G+E+ YE  LHG  GY+EVEV++ GR +R L  
Sbjct: 182 INDKDLETIDNAEQTPNYKGTEHIGKAGLEQNYEFQLHGETGYEEVEVDAGGRAVRVLSR 241

Query: 243 VPPIPGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGI 302
             P+ G ++ L LD +LQ    +    RRG++VA++P   G+LA+ S P+YDPN FV GI
Sbjct: 242 TAPVSGNNLSLTLDSKLQEITEQAFGSRRGALVAIEPSTGGILALVSKPTYDPNLFVDGI 301

Query: 303 SGKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRIP 362
            G  +  L  D  +PL+NR     YPPGST KPF+A++AL  G  TP+    DPGY+   
Sbjct: 302 RGDDWDGLNTDPDKPLLNRAIYSAYPPGSTFKPFMALAALVQGKRTPSQAIADPGYF--- 358

Query: 363 NTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGID 422
           N     FRD  + GHG VD+ KS+ ES DT++Y +A DMGID ++++M + G G  TG+D
Sbjct: 359 NFGGHQFRDDKKGGHGMVDMYKSIVESCDTYYYILANDMGIDNIAAFMGQLGLGQRTGVD 418

Query: 423 IYEESKANMPTREWKMARHKVP----WYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHG 478
           I  ES+  +P++ WK  R K P    WY G+TI +GIGQGY   TP+Q+A+A + + N G
Sbjct: 419 IQGESEGVLPSQAWKKRRFKKPEHQKWYAGETISIGIGQGYNAYTPIQLAQAVATIANDG 478

Query: 479 KVIAPHLLRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARR 538
            +  PHL++   ++     T  E +     PI  +  K   +A+    +V     GT  R
Sbjct: 479 VMYRPHLVKYITNSRSGEKTMVEPQ-----PIRDLKLKPEHLAVIKNAMVGVNKAGTGAR 533

Query: 539 AFQNMPYESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLE 598
           AF    YESAGK+GTAQVF L +G+KY       HL DH+LF  +AP + PK+ +  ++E
Sbjct: 534 AFAGAGYESAGKTGTAQVFSL-KGEKYVEGATKHHLRDHSLFIAYAPAEQPKIALAVIVE 592

Query: 599 NGGGGSSNGAPVVRQIFDHVILGKKEEEPKAESKE 633
           NGG G++  AP+ R + D+ ILGK  + P  E +E
Sbjct: 593 NGGFGAAAAAPIARMVLDYYILGKVPKGPANEDEE 627