Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 755 a.a., penicillin-binding protein 2 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  321 bits (822), Expect = 8e-92
 Identities = 191/587 (32%), Positives = 315/587 (53%), Gaps = 32/587 (5%)

Query: 35  LLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAPNRGLIFDRNGVLLAENRPVFNLEVIPE 94
           L V   + +QI++ +D+   + ++R++   I  +RGL+ DR G LLAENRP F L ++ E
Sbjct: 30  LFVVRFWYLQIHRGEDFARLARESRLRQERIYASRGLLRDREGRLLAENRPAFGLALVRE 89

Query: 95  KVPNMEETIARLQQLIEISPEKLAA-FEKERKQTRRFNSVPLLTQLTDDEVAKFSVNQHK 153
              ++  T+A++ +   I  ++L A F ++R++ + F  + L++ +  D +A+      +
Sbjct: 90  DCRDIPSTLAQVSEWTGIPLDQLTAKFNQDRQRVKPFEHLLLISDMPFDLLARIENRVLQ 149

Query: 154 FPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKDLERLDKEGKKANYQATRDIGKLGIER 213
           +PG+ +    KR YP GE++ H++GYV+  N+K+LE  DK     ++     +GK G+E 
Sbjct: 150 WPGLEIVTRSKRNYPQGELMAHILGYVAEANEKELED-DKNLNLGDF-----VGKQGLEL 203

Query: 214 YYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPPIPGKDIVLNLDIELQLYAYKLLEGRRGS 273
             E  L G  G  ++EV+  GR +       P  G++I L +D+ LQ  A+  LE + G 
Sbjct: 204 VLERRLRGQKGLHQLEVDVLGRQLNKKLVQEPQSGENIDLAIDLGLQQVAWDALEDQTGC 263

Query: 274 IVALDPKDNGVLAMASSPSYDPNAFVHGISGKAYSDLLNDKRRPLVNRTTLGIYPPGSTV 333
           +VA+DP    +LA+ + PS+D NAF  G+S K ++ L ++ R PL NR    +YPPGS  
Sbjct: 264 VVAMDPDTGKLLALVTKPSFDNNAFAAGLSLKEWTALRDNPRHPLQNRVIQSVYPPGSVW 323

Query: 334 KPFIAVSALQDGIITPNTTRNDPGYWRIPNT--DTRPFRDWLRWGHGRVDIIKSLEESVD 391
           K  +A   L +G+   ++       W         + FR W + GHGRVD+++SL ES D
Sbjct: 324 KLMMAGMLLNEGVNPADSV------WCTGEVALGKQVFRCWKKGGHGRVDMMRSLIESCD 377

Query: 392 TFFYQIAYDMGIDKLSSWMMRFGFGDLTGIDIYEESKANMPTREWKMARHKVPWYQGDTI 451
            ++YQ++   GIDK+ ++    GFG  TGID+  E    +P++ WK  R   PW++G+T+
Sbjct: 378 VYYYQMSDRFGIDKIEAFAKACGFGAATGIDLPHEKSGLVPSKTWKRRRFGEPWHRGETL 437

Query: 452 PVGIGQGYWTATPMQIAKATSVLVNHGKVIAPHLLRATIDNGEQFSTQKETEYTTYPPID 511
            + IGQG+   TP+Q+A   S L+N GK++ P LL             +E       P  
Sbjct: 438 NISIGQGFTLVTPVQVAAFVSALMNGGKLLKPSLL-----------ADEEQVVRASLPFT 486

Query: 512 GVPKKYWDMAIHGMYLVNHGAKGTARRAFQNMPYESAGKSGTAQV--FGLAEGQKYNASE 569
              +K   M + GM L  +  +GTA +  +       GK+GTAQV    +   ++     
Sbjct: 487 AAGRK---MILDGMRLTVNDDRGTA-KVLRRSDAVMGGKTGTAQVTKLKMVGEERVRTEN 542

Query: 570 LAEHLHDHALFTGFAPVKDPKVIVTFVLENGGGGSSNGAPVVRQIFD 616
           LA    DHA    +      +++V  ++E+GG G S+  PV R++FD
Sbjct: 543 LAYEHRDHAWIATWGEKAGKRLVVVVMVEHGGHGGSDAGPVARRVFD 589