Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., peptidoglycan synthase from Klebsiella michiganensis M5al

 Score =  137 bits (344), Expect = 2e-36
 Identities = 153/617 (24%), Positives = 255/617 (41%), Gaps = 115/617 (18%)

Query: 27  VGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAPNRGLIFDRNGVLLAENRPV 86
           V IL CMGLL+  +  +QI    +   + +   ++  PI   RG+I DR G  LA + PV
Sbjct: 22  VAILCCMGLLLVRVGWLQIVSPDNLVKQEDMRSLREEPIDVQRGMISDREGRPLAVSVPV 81

Query: 87  FNLEVIPEKV-----PNMEETIARLQQLIEISPEKLAAFEKERKQTRRFNSVPLLTQLTD 141
             + V P+                + Q + ++  +LA     R +         L +  +
Sbjct: 82  SAVWVDPQTTLEKGGVGYGPRWQAMAQALHLNLSELA----HRVEAHPHARFLYLARQIN 137

Query: 142 DEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKDLERLDKEGKKANYQ 201
            E A++ +++   PG+++    +R+YP G V  +++G+ +         +D +G +    
Sbjct: 138 PEQAEW-IDKLHLPGINLRDESRRFYPAGHVAANLLGFTN---------IDNQGIE---- 183

Query: 202 ATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPPIPGKDIVLNLDIELQL 261
                   G+E+ +   L G  G + V  +  G VI  +  VP +P  ++ L++D  LQ 
Sbjct: 184 --------GVEKSFNAQLTGQPGRRLVRKDRHGNVIENITEVPAVPAHNLQLSIDERLQT 235

Query: 262 YAYKLLEGR-------RGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGKAYSDLLNDK 314
                L+          G+ V +      +L+MAS P ++PN              L+D 
Sbjct: 236 VTEDALDNAVRWNKADSGAAVLIKIDTGEILSMASYPDFNPN--------NRDDAKLDDF 287

Query: 315 RRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRIPNTDTRPFRDWLR 374
           R    NR     + PGSTVKP + ++ALQ GI+ P++             DT PF   + 
Sbjct: 288 R----NRAISDTFEPGSTVKPLVLMTALQQGIVQPDSV-----------VDTHPF---VL 329

Query: 375 WGH--------GRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGIDIYEE 426
            GH          + +   L++S DT    ++  M I  L      FGFGD TG+ +  E
Sbjct: 330 DGHRIRDVGYYPELSLTGILQKSSDTGVSHLSLAMPIQHLIDTYKAFGFGDSTGLGLTGE 389

Query: 427 SKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIAPHLL 486
           S   MP R +        W Q D      G G    TP+Q+A   + + ++G  I   L 
Sbjct: 390 SAGLMPQRRY--------WGQLDRATFAFGYGL-MVTPLQLAHVYATIGSYG--IERPLS 438

Query: 487 RATIDNGEQFSTQKETEYTTYPPIDG---VPKKYWDMAIHGMYLVNHGAKGTARRAFQNM 543
              ID                PP+ G   +P++      H M  V     G  + A ++ 
Sbjct: 439 ITRID----------------PPVMGTRVMPERIVHEVEHMMESVALPGGGGTKAAVRD- 481

Query: 544 PYESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFT-GFAPVKDPKVIVTFVLENGGG 602
            Y  A K+GTA+  G  +G         +++  +  +T G AP  +PK  +  V+ +   
Sbjct: 482 -YRVAVKTGTAKKIG-PDG---------KYIDKYVAYTAGVAPASNPKFALVVVMNDPSN 530

Query: 603 GSSNGAPVVRQIFDHVI 619
           GS  G  V   +F  ++
Sbjct: 531 GSYYGGAVSAPVFSQIM 547