Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 690 a.a., penicillin-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  150 bits (378), Expect = 2e-40
 Identities = 155/623 (24%), Positives = 270/623 (43%), Gaps = 97/623 (15%)

Query: 19  RNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAPNRGLIFDRNGV 78
           R +A+    G++ C  LL    +++Q+ +       +    +    +   RG I DRNG 
Sbjct: 37  RIKAVAGLFGVIWC--LLWMRAWHVQVIEGDRLAGMARRQHVAAELVTGQRGSILDRNGQ 94

Query: 79  LLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFEKERKQTRRFNSVPLLTQ 138
           +LA +  + ++ V P +V +++ T A L + +++   ++ A   ER   RRF     L +
Sbjct: 95  VLARSVEMRSVYVHPLEVQDVDNTAAVLSRCLDLPLPQVRAALSER---RRF---AWLAR 148

Query: 139 LTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKDLERLDKEGKKA 198
             DD  A   V + K  GV +T   +R YP+ ++   ++G+V  ++DK LE         
Sbjct: 149 KVDDRKANL-VREAKLSGVGLTTEYERIYPFRQMAGQLLGFVG-LDDKGLE--------- 197

Query: 199 NYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVP-----PIPGKDIVL 253
                      G+ER  +D L GT+    +E ++ GR      Y+P      I G D+ L
Sbjct: 198 -----------GVERAMDDSLAGTSTRMVMERDAAGRRF----YLPGSSDNDIRGGDVRL 242

Query: 254 NLDIELQLYAYKLL-------EGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGKA 306
            +D+++Q +A + L       E + G  + +D +   +LA A  P ++PNA         
Sbjct: 243 TIDMQVQFFAEEALADAVDTYEAKWGGALVVDVQSGDILAWAQYPFFNPNA--------- 293

Query: 307 YSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTT-RNDPGYWR---IP 362
           Y +    + R   NR       PGST KPF+  + LQ+G+ITP+T    + G W+   I 
Sbjct: 294 YREYTPARWR---NRLASDALEPGSTFKPFLVAAGLQEGVITPDTLFYCEKGKWKTRTIN 350

Query: 363 NTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGID 422
             DT  + DWL        + K +  S +    +I  ++G  +   ++++ GFG+ TG+ 
Sbjct: 351 IRDTHSY-DWL-------PVNKIMRYSSNIGCAKIGLELGTRRYHDYLVKLGFGERTGVP 402

Query: 423 IYEESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIA 482
           + E        R+W          + D I    GQ   + T +Q+A+    L N G  + 
Sbjct: 403 VAESKGILRKPRDWS---------EADLITASFGQSV-SVTALQMAQGYLTLANDG--VL 450

Query: 483 PHLLRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAFQN 542
             L     +NG Q   Q++   +  P   GV      +A     + +H          ++
Sbjct: 451 KKLRLFIPENGAQ---QQDVVPSPSPVGPGVA-----VAAEPRRIFSHKVARQVMDMLRD 502

Query: 543 MPYESAGKSGTAQVFGLAEGQKYNASELAEHLHDH-----ALFTGFAPVKDPKVIVTFVL 597
           +  E  G    A++ G+  G K   ++ A+    +     A F G  P+  P+ ++ FV+
Sbjct: 503 V-VEEDGTGTRARIAGITIGGKTGTAQKADSSGSYGKGRLASFVGLVPIDRPRYLI-FVM 560

Query: 598 ENGGGGSSNGAPVVRQIFDHVIL 620
            +    S  G  V   +F HV L
Sbjct: 561 VDEPTRSPYGGVVAAPVFKHVAL 583