Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Rod shape-determining protein RodA from Pseudomonas fluorescens FW300-N2E2

 Score =  405 bits (1042), Expect = e-118
 Identities = 197/357 (55%), Positives = 267/357 (74%), Gaps = 3/357 (0%)

Query: 13  LFERFHIDLPLLLGVLALMGFGLVVMYSASGQSLAMMDRQAMRMAMALIIMVILAQIPPR 72
           L +R HID PLL+ +L L    L V+YSASG++  ++ +QA    + L+ MV++AQ+ PR
Sbjct: 21  LLQRMHIDGPLLILLLTLAAGSLFVLYSASGKNWDLLGKQATSFGIGLVSMVVIAQLEPR 80

Query: 73  TYESAAPILFFCGVILLVCVLLFGEISKGAQRWLDL-GFVRFQPSELLKLAVPLMVARYI 131
                 P+ +  GV LLV V + G  + GA RW+++ G +RFQPSE LK+ +P  +A Y+
Sbjct: 81  FMARWVPLAYVVGVSLLVVVDVMGHNAMGATRWINIPGVIRFQPSEFLKIIMPATIAWYL 140

Query: 132 GKHALPPSFKTLFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAGISWK-LITAA 190
            K  LPP  K +  SL+++ +P ILI +QPDLGTS+LI A G FV+F+ G+ W+ +++  
Sbjct: 141 AKRTLPPQLKHVCISLLLIGIPFILIVRQPDLGTSLLILAGGAFVLFMGGLRWRWILSVV 200

Query: 191 AVAIGAFVPVLWFFLMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGLSGKGWLH 250
           A+A+   V  +W+F+MH+YQK R+ T  DPESDPLG G++IIQSK AIGSGG+ GKGWL 
Sbjct: 201 AIAVPVSV-AMWYFVMHDYQKQRILTFLDPESDPLGTGWNIIQSKAAIGSGGVFGKGWLM 259

Query: 251 GTQSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSFGRMMA 310
           GTQS L+FLPE HTDFI AV+ EE+G++GI VLL +YL +IGRGL + + AQT FG+++A
Sbjct: 260 GTQSHLDFLPESHTDFIIAVLGEEFGLVGICVLLLIYLLLIGRGLVITAQAQTLFGKLLA 319

Query: 311 GSIVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIHTHRK 367
           GS+ ++FFVYVFVNIGMVSG+LPVVGVPLP ISYGGTS+VTL++ FG+LMSIHTHRK
Sbjct: 320 GSLTMTFFVYVFVNIGMVSGLLPVVGVPLPFISYGGTSLVTLLSAFGVLMSIHTHRK 376