Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., rod shape-determining protein RodA from Pseudomonas stutzeri RCH2

 Score =  394 bits (1011), Expect = e-114
 Identities = 190/357 (53%), Positives = 262/357 (73%), Gaps = 1/357 (0%)

Query: 12  ALFERFHIDLPLLLGVLALMGFGLVVMYSASGQSLAMMDRQAMRMAMALIIMVILAQIPP 71
           +L +R HID  LL+ +L L    L ++YSASG++  ++ +QA    + L  M+++AQ+ P
Sbjct: 20  SLLQRLHIDGLLLVLLLVLAAGSLFILYSASGKNWDLVIKQATSFGLGLGAMLVIAQLEP 79

Query: 72  RTYESAAPILFFCGVILLVCVLLFGEISKGAQRWLDL-GFVRFQPSELLKLAVPLMVARY 130
           R      P+ +   V LLV V + G  + GA RW+++ G +RFQPSE +K+ +P+ +A Y
Sbjct: 80  RFMARWVPLGYLGVVALLVAVEVVGHTAMGATRWINIPGVIRFQPSEFMKIIMPMTIAWY 139

Query: 131 IGKHALPPSFKTLFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAGISWKLITAA 190
           +   +LPPS K    SL M+ +P +LI KQPDLGTS+LI ASG FV+F+ G+ W+ I +A
Sbjct: 140 LSSRSLPPSIKHTAISLAMILIPFVLILKQPDLGTSLLILASGAFVLFIGGLRWRWIISA 199

Query: 191 AVAIGAFVPVLWFFLMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGLSGKGWLH 250
             A+      +W+F++ +YQK RV T  DPESDPLG G++IIQSK AIGSGG+ GKGWL 
Sbjct: 200 VAAVVPIAVAMWYFVLRDYQKQRVLTFLDPESDPLGTGWNIIQSKAAIGSGGVFGKGWLA 259

Query: 251 GTQSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSFGRMMA 310
           GTQS L+FLPE HTDFI AV+AEE+G++G+ +LL +Y+ +I RGL +   AQT FG+++A
Sbjct: 260 GTQSHLDFLPESHTDFIIAVLAEEFGLVGVCLLLLVYILLITRGLVITVQAQTLFGKLLA 319

Query: 311 GSIVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIHTHRK 367
           G++ ++FFVYVFVNIGMVSG+LPVVGVPLP ISYGGTS+VTL++GFG+LMSIHTHRK
Sbjct: 320 GALTMTFFVYVFVNIGMVSGLLPVVGVPLPFISYGGTSLVTLLSGFGVLMSIHTHRK 376