Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., cell elongation-specific peptidoglycan biosynthesis regulator RodA from Pseudomonas syringae pv. syringae B728a

 Score =  410 bits (1054), Expect = e-119
 Identities = 205/362 (56%), Positives = 271/362 (74%), Gaps = 4/362 (1%)

Query: 9   QNRALF-ERFHIDLPLLLGVLALMGFGLVVMYSASGQSLAMMDRQAMRMAMALIIMVILA 67
           + RA F +R HID PLL+ +L L    L V+YSASG++  ++ +QA    + L+ MV++A
Sbjct: 16  RRRATFLQRIHIDGPLLILLLTLAAGSLFVLYSASGKNWDLLIKQASSFGIGLVAMVVIA 75

Query: 68  QIPPRTYESAAPILFFCGVILLVCVLLFGEISKGAQRWLDL-GFVRFQPSELLKLAVPLM 126
           Q+ PR      P+L+  GV+LLV V + G  + GA RW+++ G +RFQPSE LK+ +P  
Sbjct: 76  QLEPRFMARWVPVLYVIGVLLLVVVDVMGHNAMGATRWINIPGVIRFQPSEFLKIIMPAT 135

Query: 127 VARYIGKHALPPSFKTLFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAGISWK- 185
           +A Y+ K  LPP  K +  SL ++ VP ILI +QPDLGTS+LI ASG FV+F+AG+ W+ 
Sbjct: 136 IAWYLSKRTLPPHLKHVAVSLALIGVPFILIVRQPDLGTSLLILASGAFVLFMAGLRWRW 195

Query: 186 LITAAAVAIGAFVPVLWFFLMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGLSG 245
           +I+  A AI A V  +WFF MH+YQK RV T  DPESDPLG G++IIQSK AIGSGG+ G
Sbjct: 196 IISVLAAAIPAAV-AMWFFFMHDYQKQRVLTFLDPESDPLGTGWNIIQSKAAIGSGGVFG 254

Query: 246 KGWLHGTQSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSF 305
           KGWL GTQS L+FLPE HTDFI AV+ EE+G++GI  LL +Y+ +IGRGL + + AQT F
Sbjct: 255 KGWLLGTQSHLDFLPESHTDFIIAVLGEEFGLVGICALLIIYMLLIGRGLVITAQAQTLF 314

Query: 306 GRMMAGSIVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIHTH 365
           G+++AG++ ++FFVYVFVNIGMVSG+LPVVGVPLP ISYGGTS+VTL++ FG+LMSIHTH
Sbjct: 315 GKLLAGALTMTFFVYVFVNIGMVSGLLPVVGVPLPFISYGGTSLVTLLSAFGVLMSIHTH 374

Query: 366 RK 367
           RK
Sbjct: 375 RK 376