Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., rod shape-determining protein RodA from Parabacteroides merdae CL09T00C40

 Score =  157 bits (397), Expect = 6e-43
 Identities = 82/201 (40%), Positives = 128/201 (63%), Gaps = 9/201 (4%)

Query: 167 ILIAASGIFVIFLAGISWKLITAAAVAIGAF-----VPVLWFFLMHEYQKTRVRTLFDPE 221
           IL+ A  +  + +   +W  +  A  A+G+      V  ++  ++  +Q+ R++     E
Sbjct: 287 ILLVACYLVFLSIRNWAWHYVLIAVFALGSLAFMYSVDYVFTDILEPHQQIRIKVSLGLE 346

Query: 222 SDPLGAGYHIIQSKIAIGSGGLSGKGWLHGTQSQLEFLPERHTDFIFAVIAEEWGMIGIL 281
            DP GAGY++ QSKIAIGSGGL+GKG+L+GTQ++L+++PE+ TDFIF  + EE G IG  
Sbjct: 347 DDPSGAGYNVNQSKIAIGSGGLTGKGFLNGTQTKLKYVPEQDTDFIFCTVGEEQGFIGAS 406

Query: 282 VLLSLYLFIIGRGLYLASHAQTSFGRMMAGSIVLSFFVYVFVNIGMVSGILPVVGVPLPL 341
            +L L+ F+I R + LA    ++F R+   S+   FF ++ +NIGMV+G+ PV+G+PLP 
Sbjct: 407 AVLLLFGFLILRLIVLAERQSSTFNRVYGYSVASIFFFHLAINIGMVTGLTPVIGIPLPF 466

Query: 342 ISYGGTSMVTLMAGFGILMSI 362
            SYGG+S    + GF IL+ I
Sbjct: 467 FSYGGSS----LWGFTILLFI 483



 Score = 62.4 bits (150), Expect = 3e-14
 Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 2/153 (1%)

Query: 52  QAMRMAMALIIMVILAQIPPRTYESAAPILFFCGVILLVCVLLFGEISKGAQRWLDLGFV 111
           Q M M +++ ++ +L  +    ++  A +++   ++LL+  +      KG+  WL LG V
Sbjct: 66  QLMWMGLSVGLIFVLLMLESEFFDVFAYLIYAGFIVLLIATIFLAPNIKGSHSWLVLGPV 125

Query: 112 RFQPSELLKLAVPLMVARYIGKHALPPSF-KTLFASLVMVFVPTILIAKQPDLGTSILIA 170
           R QP+E  K A  L VA+ +  +    +  K   A L ++F+P I I  Q + G S L+ 
Sbjct: 126 RLQPAEFAKFATALAVAKLMNTYGFKLTVPKNFIAVLSLIFLPMICILLQQETG-SALVY 184

Query: 171 ASGIFVIFLAGISWKLITAAAVAIGAFVPVLWF 203
            +   +++  G+S  ++ +    +  FV  + F
Sbjct: 185 LAFFLMLYREGMSGYILLSGVCVVVFFVTSMKF 217