Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., rod shape-determining protein rodA from Phaeobacter inhibens DSM 17395

 Score =  289 bits (740), Expect = 8e-83
 Identities = 149/360 (41%), Positives = 230/360 (63%), Gaps = 13/360 (3%)

Query: 18  HIDLPLLLGVLALMGFGLVVMYSASGQSLA-MMDRQAMRMAMALIIMVILAQIPPRTYES 76
           +++ PL+L + ++   G +++YS +G S +  ++ Q  R  + L +M+++A IP   + +
Sbjct: 20  YLNWPLVLLLASVASVGFLMLYSVAGGSFSPWVEPQVKRFVLGLSVMLVVAMIPIWFWRN 79

Query: 77  AAPILFFCGVILLVCVLLFGEISKGAQRWLDLGFVRFQPSELLKLAVPLMVARYIGKHAL 136
            + + +   V+LLV V  FG +  GAQRW+D+GF+R QPSEL+K+ + +++A Y     L
Sbjct: 80  ISVLAYLVSVLLLVAVEFFGTVGMGAQRWIDIGFMRLQPSELMKITLVMLLAAYYDW--L 137

Query: 137 PPSF----KTLFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAGISWKLITAAAV 192
           PP      + +   ++++ +PT L+ +QPDLGTSIL+ A+G  V+FLAG+ W    A   
Sbjct: 138 PPERCSRPQWVILPVILILLPTFLVLRQPDLGTSILLMAAGGGVMFLAGVHWAYFAAVIG 197

Query: 193 AIGAFVPVLW------FFLMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGLSGK 246
           A    V  ++      + L+ +YQ  R+ T  DP  DPLGAGYHI QSKIA+GSGG SG+
Sbjct: 198 AGVGLVATVFKSRGTDWQLLKDYQFRRIDTFLDPSQDPLGAGYHITQSKIALGSGGWSGR 257

Query: 247 GWLHGTQSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSFG 306
           G++ GTQS+L FLPE+HTDFIF  +AEE+G IG   LL +Y+ +I   +  A   +  F 
Sbjct: 258 GFMQGTQSRLNFLPEKHTDFIFTTLAEEFGFIGGFTLLFIYMLVITFCIATALATKDRFA 317

Query: 307 RMMAGSIVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIHTHR 366
            ++   I +SFF++  VN+ MV G+ PVVGVPLP++SYGG+ M+ LM  FG++ S + HR
Sbjct: 318 SLVTLGIAISFFLFFAVNMSMVMGLAPVVGVPLPMVSYGGSVMLVLMGAFGLVQSANIHR 377