Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., rod shape-determining protein RodA from Pedobacter sp. GW460-11-11-14-LB5

 Score =  202 bits (513), Expect = 2e-56
 Identities = 123/411 (29%), Positives = 214/411 (52%), Gaps = 60/411 (14%)

Query: 17  FHIDLPLLLGVLALMGFGLVVMYSASGQSLA-------MMDRQAMRMAMALIIMVILAQI 69
           F++D   +L  +AL   G V +Y++             +  +Q + +   LI+ + +   
Sbjct: 11  FNVDWITVLIYIALCAIGFVNIYASVPPEQTAVFGFSTLYGKQLIYIITGLILGLSILLF 70

Query: 70  PPRTYESAAPILFFCGVILLVCVLLFGEISKGAQRWLDLGFVRFQPSELLKLAVPLMVAR 129
             R +   +P ++   ++LL+ VLL G    G Q W+ +G  + QP+E  K    L++AR
Sbjct: 71  DGRLFNVFSPFIYGGTLLLLMAVLLIGNKVAGNQAWIAIGSFKLQPAEFAKFGTALLLAR 130

Query: 130 YIGKHALPPSF---KTLFASLVMVFVPTILIAKQPDLGTSILIAA----------SGIFV 176
           Y+G  A  P F   K++  + ++V  P +LI  QPD G++++  A          SG F+
Sbjct: 131 YVG--AFNPKFRDIKSIMIAGLIVGAPLLLIMLQPDTGSALVFLAFMFPLYREGLSGYFL 188

Query: 177 IFLAGI--------------------------------------SWKLITAAAVAIGAFV 198
           +   G+                                      S  L+T  A+     +
Sbjct: 189 LIFLGMIVLFIADFLVPTYILIIIITTIAGLFIYNNRRKQKIIFSTVLVTVFAIGYLFLI 248

Query: 199 PVLWFFLMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGLSGKGWLHGTQSQLEF 258
            + +  ++  +Q++R+  +   ++D  GAGY++IQS+IAIGSG  +G+G+L GTQ++  +
Sbjct: 249 KIAYEKVLAPHQRSRIELMLGLKTDNKGAGYNVIQSQIAIGSGQGTGRGFLQGTQTKYGY 308

Query: 259 LPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSFGRMMAGSIVLSFF 318
           +PE+ TDFIF+ I EEWG +G  V++ LY+F++ R + LA   +++F R+   S+    F
Sbjct: 309 VPEQSTDFIFSTIGEEWGFMGCSVVIGLYMFLLLRLVNLAERQRSTFSRVYGYSVACILF 368

Query: 319 VYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIHTHRKAF 369
            +VF+NIGM  GI+PV+G+PLPLISYGG+S+ +      I + + ++R  F
Sbjct: 369 FHVFINIGMTIGIIPVIGIPLPLISYGGSSLWSFTILLFIFLKLDSNRMGF 419