Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., rod shape-determining protein RodA (RefSeq) from Shewanella loihica PV-4

 Score =  493 bits (1268), Expect = e-144
 Identities = 243/355 (68%), Positives = 297/355 (83%)

Query: 13  LFERFHIDLPLLLGVLALMGFGLVVMYSASGQSLAMMDRQAMRMAMALIIMVILAQIPPR 72
           +++R HIDLPLLLG+LALM +GL V+YSA G+ +A+M+RQ +RM ++L IM+ +AQI P 
Sbjct: 10  IWQRMHIDLPLLLGLLALMCYGLFVIYSAGGEDMALMERQLIRMGLSLGIMLFVAQINPE 69

Query: 73  TYESAAPILFFCGVILLVCVLLFGEISKGAQRWLDLGFVRFQPSELLKLAVPLMVARYIG 132
                A  ++  GVILL+ V  FGEI+KGAQRWL+LGF+ FQPSEL+KLA P+ +A YI 
Sbjct: 70  VLRRWAFPIYIAGVILLLGVHFFGEINKGAQRWLNLGFMEFQPSELIKLAFPITMAWYIS 129

Query: 133 KHALPPSFKTLFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAGISWKLITAAAV 192
           K  LPP  + L  + V++ +PT+LIAKQPDLGTSIL+AASGIFV+FL+G+SW ++ +   
Sbjct: 130 KFPLPPKKRYLAGAGVILLIPTLLIAKQPDLGTSILVAASGIFVLFLSGMSWAIVGSFIG 189

Query: 193 AIGAFVPVLWFFLMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGLSGKGWLHGT 252
            + A +PVLWFFLMH+YQ+TRV TL DPE DPLGAGYHIIQSKIAIGSGG+ GKGWL GT
Sbjct: 190 GVLAMLPVLWFFLMHDYQRTRVLTLLDPEKDPLGAGYHIIQSKIAIGSGGIWGKGWLDGT 249

Query: 253 QSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSFGRMMAGS 312
           QSQLEFLPERHTDFIFAVI EE+G+IG L+LL LYL++IGRGL +AS AQTSF R++AGS
Sbjct: 250 QSQLEFLPERHTDFIFAVIGEEFGLIGSLILLCLYLYVIGRGLVIASRAQTSFARLLAGS 309

Query: 313 IVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIHTHRK 367
           I L+FFVYVFVNIGMVSG+LPVVGVPLPLISYGGTSM+TLM GFGILMSIHTHR+
Sbjct: 310 ITLTFFVYVFVNIGMVSGLLPVVGVPLPLISYGGTSMLTLMTGFGILMSIHTHRR 364