Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., rod shape-determining protein RodA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  501 bits (1291), Expect = e-146
 Identities = 243/359 (67%), Positives = 301/359 (83%)

Query: 9   QNRALFERFHIDLPLLLGVLALMGFGLVVMYSASGQSLAMMDRQAMRMAMALIIMVILAQ 68
           Q + +++R HIDLPLLLG+LA+MGFGL V+YSASG+ L MM+RQ  RM +++ +M  +AQ
Sbjct: 10  QRQNIWQRLHIDLPLLLGLLAVMGFGLFVIYSASGEDLGMMERQLFRMFLSICVMFTMAQ 69

Query: 69  IPPRTYESAAPILFFCGVILLVCVLLFGEISKGAQRWLDLGFVRFQPSELLKLAVPLMVA 128
           I P   +  A  ++  GV+LL+ V  FGEI+KGAQRWL+LGF+ FQPSEL+KLA P+ +A
Sbjct: 70  INPEALKRWALPIYLAGVVLLLAVHFFGEINKGAQRWLNLGFMEFQPSELIKLAFPITMA 129

Query: 129 RYIGKHALPPSFKTLFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAGISWKLIT 188
            YI K  LPP  + L  + V++ +PT+LIAKQPDLGTSIL+AASGIFV+FL+G+SW ++ 
Sbjct: 130 WYISKFPLPPKKRYLAGAGVILLIPTLLIAKQPDLGTSILVAASGIFVLFLSGMSWAIVG 189

Query: 189 AAAVAIGAFVPVLWFFLMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGLSGKGW 248
               A+ AF+P+LW+FLMH+YQ+TRV TL DPE DPLGAGYHIIQSKIAIGSGGL GKGW
Sbjct: 190 GFIAAVLAFLPILWYFLMHDYQRTRVLTLLDPEQDPLGAGYHIIQSKIAIGSGGLWGKGW 249

Query: 249 LHGTQSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSFGRM 308
           L GTQSQLEF+PERHTDFIFAVI EE+G+IG ++LL +YL+IIGRGL +AS+AQTSF R+
Sbjct: 250 LDGTQSQLEFIPERHTDFIFAVIGEEFGLIGSIILLLMYLYIIGRGLVIASNAQTSFARL 309

Query: 309 MAGSIVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIHTHRK 367
           +AGSI L+FFVYVFVNIGMVSGILPVVGVPLPL+SYGGTSM+TLM GFGILMSIHTHR+
Sbjct: 310 LAGSITLTFFVYVFVNIGMVSGILPVVGVPLPLVSYGGTSMLTLMTGFGILMSIHTHRR 368