Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., rod shape-determining protein RodA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  250 bits (639), Expect = 4e-71
 Identities = 140/359 (38%), Positives = 203/359 (56%), Gaps = 8/359 (2%)

Query: 18  HIDLPLLLGVLALMGFGLVVMYSASGQSL-------AMMDRQAMRMAMALIIMVILAQIP 70
           H++  LL     L   G   +YSASG  +       +   +Q +   + L  M+      
Sbjct: 11  HMNWGLLAFTFILFCVGAANLYSASGVRIEDGIEVSSFYQKQLVWGLIGLGGMITFMLFD 70

Query: 71  PRTYESAAPILFFCGVILLVCVLLFGEISKGAQRWLDLGFVRFQPSELLKLAVPLMVARY 130
            R  +S A  +F   V+LL CV  FG++  GA+RWL  G    QPSE+ K+++ ++ AR 
Sbjct: 71  YRHLKSLAWPIFILTVLLLACVPPFGKVIYGARRWLSFGLFNLQPSEIAKISILILGARL 130

Query: 131 IGKHALPPSFKTLFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAGISWKLITAA 190
           +       ++  LF  L +  VP   I  QPDLGT++ +      +I   GI W+++   
Sbjct: 131 LSGDKNSLNWTELFKVLGVGLVPAAFIVIQPDLGTTLNLLLLLGGMILYHGIQWRVLKVC 190

Query: 191 AVAIGAFVPVLWFFLMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGLSGKGWLH 250
              +   +P+ WF L H+YQK R+ T  DP++DPLGAGYHIIQS+IAIGSG L GKG+L 
Sbjct: 191 LAVVPPLLPLGWFCL-HDYQKQRILTFLDPQNDPLGAGYHIIQSQIAIGSGELWGKGFLG 249

Query: 251 GTQSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSFGRMMA 310
           GTQSQL FLPE+HTDF  AV  EEWG +G + LL+L+   +      A  A+  FG  +A
Sbjct: 250 GTQSQLRFLPEKHTDFAVAVFGEEWGFVGCVALLALFSLFLLSIFNTARDAKDRFGSTLA 309

Query: 311 GSIVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIHTHRKAF 369
             +   FF  + +N GMV GI+PVVG+PLP ISYGG++ +   +  G+++++   R  F
Sbjct: 310 AGVFFYFFWQILINTGMVVGIMPVVGIPLPFISYGGSATLVNFSLIGLVLNVSMRRFVF 368