Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., rod shape-determining protein RodA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  290 bits (742), Expect = 4e-83
 Identities = 149/360 (41%), Positives = 230/360 (63%), Gaps = 13/360 (3%)

Query: 18  HIDLPLLLGVLALMGFGLVVMYSASGQSLA-MMDRQAMRMAMALIIMVILAQIPPRTYES 76
           H++  L+L ++A+  FG +++YS +G S+   ++ Q  R A+ L IM ++A  P   + +
Sbjct: 20  HLNWGLILLIVAVASFGFLMLYSVAGGSMTPWVEPQMKRFALGLAIMFVVAFTPIYVWRN 79

Query: 77  AAPILFFCGVILLVCVLLFGEISKGAQRWLDLGFVRFQPSELLKLAVPLMVARYIGKHAL 136
            + + +   ++LL+ V  FG +  GAQRW+DLGF+R QPSEL+K+ + +++A Y     L
Sbjct: 80  LSVLAYIVSLVLLLAVEFFGVVGMGAQRWIDLGFMRLQPSELMKITLIMLLAAYYDVLDL 139

Query: 137 PPSFKTLFA--SLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAGISWKLITAAAVAI 194
             +    +    ++++ +P  L+ +QPDLGTSIL+ A G  V+F+AG+ W  +  A V +
Sbjct: 140 KKTSHPFWVLVPVLLIMIPVALVLRQPDLGTSILLMAGGGVVMFVAGVHW--LYFAVVIL 197

Query: 195 GAFVPVLWFF--------LMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGLSGK 246
           G    V            L+ +YQ  R+ T  +PE+DPLGAGYHI QSKIA+GSGG++GK
Sbjct: 198 GGIALVAAVLMSRGTDWQLLQDYQYRRIDTFLNPENDPLGAGYHITQSKIALGSGGVTGK 257

Query: 247 GWLHGTQSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSFG 306
           G++ GTQS+L FLPE+HTDFIF  +AEE+G IG + LL+LY  I+   L  A   +  F 
Sbjct: 258 GFMEGTQSRLNFLPEKHTDFIFTTLAEEFGFIGGISLLALYGLIVLFCLVSAMRTKDRFS 317

Query: 307 RMMAGSIVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIHTHR 366
            ++   +  +FF +  VN+ MV G+ PVVGVPLPL+S+GG++M+ L+ GFG++ S H HR
Sbjct: 318 SLLIIGVAATFFFFFSVNMAMVMGLAPVVGVPLPLVSFGGSAMLVLLVGFGLVQSAHVHR 377