Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., rod shape-determining protein RodA from Caulobacter crescentus NA1000

 Score =  305 bits (781), Expect = 1e-87
 Identities = 159/363 (43%), Positives = 236/363 (65%), Gaps = 7/363 (1%)

Query: 9   QNRALFERFHIDLPLLLGVLALMGFGLVVMYSASGQSLA-MMDRQAMRMAMALIIMVILA 67
           ++R   +   ID    L +  + G G ++++S +G S      +  +R  +  I+MVILA
Sbjct: 13  RDRPTIKFMEIDWTFCLFLCLIAGAGALMLFSIAGASWEPWAAKHLIRFGLYFIMMVILA 72

Query: 68  QIPPRTYESAAPILFFCGVILLVCVLLFGEISKGAQRWLDLGFVRFQPSELLKLAVPLMV 127
               R +  AA  ++  G++LL+ V + G++S GAQRWL +G  RFQPSE++K+ + L +
Sbjct: 73  MCDLRWWFMAAYPIYVVGLLLLIAVEVAGDVSLGAQRWLSIGGFRFQPSEIMKIGLVLAL 132

Query: 128 ARYIGKHALPPSFKTLFASLV----MVFVPTILIAKQPDLGTSILIAASGIFVIFLAGIS 183
           ARY   H L      +   L+    M+  P +L+A QPDLGT++LIAA+G+ ++ LAG+S
Sbjct: 133 ARYY--HGLSADSARMSWRLLIPAGMIAAPVLLVAHQPDLGTALLIAATGLSIVVLAGLS 190

Query: 184 WKLITAAAVAIGAFVPVLWFFLMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGL 243
           W++I A   A  A +P    F++H+YQ+ RV T  +PE+DP G GY I+QSKIA+GSGGL
Sbjct: 191 WRIIFAGIAAFVAAIPPFVMFVLHDYQRHRVMTFLNPEADPSGKGYQIVQSKIALGSGGL 250

Query: 244 SGKGWLHGTQSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQT 303
            GKG+  G+QSQL FLPE+ TDFIFA +AEE+G +G   +L LY  +I   L +AS + +
Sbjct: 251 LGKGFGLGSQSQLNFLPEKQTDFIFATLAEEFGFVGCFAVLFLYGAVIFMALRIASISHS 310

Query: 304 SFGRMMAGSIVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIH 363
            FGR+ AG  + +F VYV +N  MV G+ PVVGVP+P++SYGGT M+T+M GFG++ ++ 
Sbjct: 311 HFGRLAAGGTISTFAVYVLINGAMVMGMAPVVGVPMPMLSYGGTVMLTVMIGFGLIQAVR 370

Query: 364 THR 366
            HR
Sbjct: 371 VHR 373