Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., FtsW/RodA/SpoVE family cell cycle protein from Bifidobacterium breve UCC2003

 Score =  113 bits (283), Expect = 1e-29
 Identities = 95/363 (26%), Positives = 170/363 (46%), Gaps = 35/363 (9%)

Query: 27  VLALMGFGLVVMY---SASGQSLAMMDRQAMRMAMALIIMVILAQIPPRTYESAAPILFF 83
           VL L   G+ ++     + G  +A      + +A+ L  ++I+     R     + +   
Sbjct: 71  VLLLTATGITMIARIDQSEGWDIAKRQIIWLYVALVLSTLIIVFLRDYRVLRRFSYVSMV 130

Query: 84  CGVILLVCVLL--FGEISKGAQRWLDL-GFVRFQPSELLKLAVPLMVARYI--------- 131
            G+ILL+  +L   G    GA+ W+ + G   FQP E  KL +    A Y+         
Sbjct: 131 VGLILLLSPMLPVIGTEINGARIWVRIPGLGSFQPGEFAKLFLAFFFAAYLFDHRDQLAV 190

Query: 132 -GKHALP---PSFKTLFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAG--ISWK 185
            GK  L    P  K L   +V+      ++  Q DLGTS++  A  + +++ +    SW 
Sbjct: 191 GGKKVLGLQLPRIKDLGPIIVVWIASMGVLVVQHDLGTSLMFFAMFVAMLYTSTGRKSWI 250

Query: 186 LITAAAVAIGAFVPVLWFFLMHEYQKTRVRTLFDPESDPL-----GAGYHIIQSKIAIGS 240
           +I     A GA +    F     +  +RV     P S+       G  + ++     + S
Sbjct: 251 VIGLITFAAGAMLAASMF----SHVGSRVDAWLHPFSNEQYTKSPGGSWQLVTGIFGLAS 306

Query: 241 GGLSGKGWLHGTQSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASH 300
           GG+ G G   G  S + F    ++DFI+A + EE G++G++ +L LYL II  G  +A  
Sbjct: 307 GGMIGTGLGQGHPSLVTFA---NSDFIYASLGEELGLVGVMAILMLYLIIIASGFIVAMK 363

Query: 301 AQTSFGRMMAGSIVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVT--LMAGFGI 358
            +  FG+++A  +V +    VF  +G ++ ++P+ G+ LP ++ GG+S++   ++A   I
Sbjct: 364 IKDGFGKLLASGLVFTMAFQVFTVVGGITLVIPLTGLTLPYMAAGGSSLIANYILAALLI 423

Query: 359 LMS 361
           ++S
Sbjct: 424 VIS 426



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 8/95 (8%)

Query: 277 MIGILVLLSLYLFIIGRGL-----YLASHAQTSFGRMMAGSIVLSFF--VYVFVNIGMVS 329
           ++G+++LLS  L +IG  +     ++      SF       + L+FF   Y+F +   ++
Sbjct: 130 VVGLILLLSPMLPVIGTEINGARIWVRIPGLGSFQPGEFAKLFLAFFFAAYLFDHRDQLA 189

Query: 330 -GILPVVGVPLPLISYGGTSMVTLMAGFGILMSIH 363
            G   V+G+ LP I   G  +V  +A  G+L+  H
Sbjct: 190 VGGKKVLGLQLPRIKDLGPIIVVWIASMGVLVVQH 224