Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., rod shape-determining protein RodA (RefSeq) from Shewanella sp. ANA-3

 Score =  498 bits (1283), Expect = e-146
 Identities = 243/355 (68%), Positives = 297/355 (83%)

Query: 13  LFERFHIDLPLLLGVLALMGFGLVVMYSASGQSLAMMDRQAMRMAMALIIMVILAQIPPR 72
           +++R HIDLPLLLG+ A+MGFGL V+YSASG+ L MM+RQ  RM ++L IM  +AQI P 
Sbjct: 9   IWQRMHIDLPLLLGLFAVMGFGLFVIYSASGEDLGMMERQLFRMFLSLGIMFTMAQINPE 68

Query: 73  TYESAAPILFFCGVILLVCVLLFGEISKGAQRWLDLGFVRFQPSELLKLAVPLMVARYIG 132
             +  A  ++  G++LL+ V  FGEI+KGAQRWL+LGF+ FQPSEL+KLA P+ +A YI 
Sbjct: 69  ALKRWALPIYLAGIVLLLGVHFFGEINKGAQRWLNLGFMEFQPSELIKLAFPITMAWYIS 128

Query: 133 KHALPPSFKTLFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAGISWKLITAAAV 192
           K  LPP  + L  + V++ VPT+LIAKQPDLGTSIL+AASGIFV+FL+G+SW ++     
Sbjct: 129 KFPLPPKKRYLAGAAVILLVPTLLIAKQPDLGTSILVAASGIFVLFLSGMSWAIVGGFIA 188

Query: 193 AIGAFVPVLWFFLMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGLSGKGWLHGT 252
           A+ AF+P+LW+FLMH+YQ+TRV TL DPE DPLGAGYHIIQSKIAIGSGGL GKGWL GT
Sbjct: 189 AVLAFLPILWYFLMHDYQRTRVMTLLDPEKDPLGAGYHIIQSKIAIGSGGLWGKGWLDGT 248

Query: 253 QSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSFGRMMAGS 312
           QSQLEF+PERHTDFIFAVI EE+G+IG ++LL +YL+IIGRGL +AS AQTSF R++AGS
Sbjct: 249 QSQLEFIPERHTDFIFAVIGEEFGLIGSIILLLMYLYIIGRGLVIASRAQTSFARLLAGS 308

Query: 313 IVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIHTHRK 367
           I L+FFVYVFVNIGMVSGILPVVGVPLPL+SYGGTSM+TLM GFGILMSIHTHR+
Sbjct: 309 ITLTFFVYVFVNIGMVSGILPVVGVPLPLVSYGGTSMLTLMTGFGILMSIHTHRR 363