Pairwise Alignments

Query, 263 a.a., septal ring lytic transglycosylase RlpA from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., rare lipoprotein A (RefSeq) from Shewanella amazonensis SB2B

 Score =  248 bits (634), Expect = 8e-71
 Identities = 125/262 (47%), Positives = 162/262 (61%), Gaps = 12/262 (4%)

Query: 8   LLIVLILAGCSSP------------GGRYDMSDDQAPDTPLSVEHIEDAHPQYEPYSFGG 55
           L + LIL GCSS             G RY    D  PD+   V  + DA P+YEPYS GG
Sbjct: 13  LALTLILGGCSSSPEPGSSTKTSTKGDRYHQKHDAYPDSAPDVSQVPDAIPRYEPYSRGG 72

Query: 56  NKDYNLRGKSYRIIKNPKGFTESGKASWYGKKFHGHLTSNGEIYDMYSMTAAHKTLPIPS 115
           NK Y + GKSY ++ +   F ESG ASWYG KFHG+ TSNGE+YDMYSMTAAHKTLP+PS
Sbjct: 73  NKPYTVMGKSYNVLASAANFRESGLASWYGTKFHGYHTSNGEVYDMYSMTAAHKTLPLPS 132

Query: 116 YVKVTNTDNGKSTVVRVNDRGPFHDGRIIDLSYAAAYKIGVVQAGTANVRIEVITVDKPT 175
           +V+V N DN K  +VRVNDRGPFH+GRIIDLSYAAAY++G++  GTA V IE I +  P 
Sbjct: 133 FVRVRNLDNKKEVIVRVNDRGPFHEGRIIDLSYAAAYRLGMLNTGTARVEIETIYIPSPE 192

Query: 176 KPRPKSKNNALEYVIQVVSSQHIERVRTLAQNLGQNLSAPSFVESTNNTHRLFLGPFTDD 235
                S  +   Y IQVV+S+  ER+  L + L         ++  +  +RL LGP   +
Sbjct: 193 NEAYTSSQDPNHYFIQVVASKDRERLNRLGKELAAKYQLGYRLQEKDTLYRLQLGPLGHE 252

Query: 236 DLTQTLLEQVKSAGYDSAFIKT 257
            +   +L+Q++  GY S ++ T
Sbjct: 253 GIASKMLQQMRQQGYPSGYLVT 274