Pairwise Alignments

Query, 263 a.a., septal ring lytic transglycosylase RlpA from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., rare lipoprotein A (RefSeq) from Shewanella loihica PV-4

 Score =  258 bits (660), Expect = 7e-74
 Identities = 125/253 (49%), Positives = 172/253 (67%), Gaps = 1/253 (0%)

Query: 6   LYLLIVLILAGCSSPGGRYDMSDDQAPDTPLSVEHIEDAHPQYEPYSFGGN-KDYNLRGK 64
           L  +++L+LAGCSS  GRY ++DD AP     V  +EDAHP++EPYS GGN K+Y + GK
Sbjct: 12  LSFILLLVLAGCSSQSGRYKIADDVAPTDAPDVSKVEDAHPKFEPYSRGGNRKEYTVLGK 71

Query: 65  SYRIIKNPKGFTESGKASWYGKKFHGHLTSNGEIYDMYSMTAAHKTLPIPSYVKVTNTDN 124
           +YR++   KG+ ++G ASWYG KFHGHLTSNGE YDMYSM+AAHKTLP+PSYVKVTN  N
Sbjct: 72  TYRVLDTGKGYQKTGIASWYGAKFHGHLTSNGETYDMYSMSAAHKTLPLPSYVKVTNLAN 131

Query: 125 GKSTVVRVNDRGPFHDGRIIDLSYAAAYKIGVVQAGTANVRIEVITVDKPTKPRPKSKNN 184
            KS VVRVNDRGPFHD RIIDLSYAAA+++ +++ GTA V++EVI ++ P      +   
Sbjct: 132 DKSVVVRVNDRGPFHDNRIIDLSYAAAHRLDMLKTGTAKVQLEVIYIENPESVALAALQE 191

Query: 185 ALEYVIQVVSSQHIERVRTLAQNLGQNLSAPSFVESTNNTHRLFLGPFTDDDLTQTLLEQ 244
              + +QV++S    R+  LAQ L       + ++ + N +RL LGP     +   L + 
Sbjct: 192 TKLHYVQVIASSDKGRIDHLAQTLADQYQVQTRIQQSGNLYRLQLGPIGRQQIAAQLHQT 251

Query: 245 VKSAGYDSAFIKT 257
           ++  GY  +++ T
Sbjct: 252 LQQNGYPQSYLVT 264