Pairwise Alignments

Query, 263 a.a., septal ring lytic transglycosylase RlpA from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., rare lipoprotein A (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  235 bits (599), Expect = 9e-67
 Identities = 117/269 (43%), Positives = 172/269 (63%), Gaps = 19/269 (7%)

Query: 6   LYLLIVLILAGCSSPG-----------------GRYDMSDDQAPDTPLSVEHIEDAHPQY 48
           L L    +LA CSS                   GRY + +D+ P  P +V+H+ +A P+Y
Sbjct: 11  LMLSCCFVLAACSSSNSASASASNKNKNMEPNKGRYSLKNDKMPLNPPNVDHVPNATPKY 70

Query: 49  EPYSFGGNKDYNLRGKSYRIIKNPKGFTESGKASWYGKKFHGHLTSNGEIYDMYSMTAAH 108
           EPYS  GNK Y + G+SY ++ + +GF+E+G+ASWYG+KFHG+ TSNGE YDMY M+ AH
Sbjct: 71  EPYSRRGNKPYTVYGESYTVLNSGEGFSETGRASWYGEKFHGYETSNGEPYDMYGMSGAH 130

Query: 109 KTLPIPSYVKVTNTDNGKSTVVRVNDRGPFHDGRIIDLSYAAAYKIGVVQAGTANVRIEV 168
           KTLP+PSY +VTN DN K  ++R+NDRGPFH  RI+DLSYAAAYK+G++  GTA ++++V
Sbjct: 131 KTLPLPSYARVTNLDNNKQVIIRINDRGPFHSERILDLSYAAAYKLGMLGTGTARIKLDV 190

Query: 169 ITVDK--PTKPRPKSKNNALEYVIQVVSSQHIERVRTLAQNLGQNLSAPSFVESTNNTHR 226
           I +     T+    S +++  + IQ+V+S+  +R+  +A++L +     + V+  NN  R
Sbjct: 191 IYIGSKAATQSAIASVHSSGNHYIQLVASKDKQRLHKMAKDLEKKYQVKTRVQPANNMFR 250

Query: 227 LFLGPFTDDDLTQTLLEQVKSAGYDSAFI 255
           L LGP    +L   LL +VK  GY + +I
Sbjct: 251 LQLGPIGQAELADRLLIKVKQDGYPAGYI 279