Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., Murein-DD-endopeptidase (EC 3.4.99.-) from Pseudomonas fluorescens FW300-N2E2

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 74/281 (26%), Positives = 133/281 (47%), Gaps = 18/281 (6%)

Query: 4   SILKSVLASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDTKLS 63
           S+  +   S IT ++    T  A+P  T    Q+A+   +L+D  + KV+     D  + 
Sbjct: 22  SLFIAFTGSFITQNVAAQET-IAAPRDTAKL-QVASGSAMLLDLQTDKVVYSSNPDVVVP 79

Query: 64  PASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVS--DL 121
            AS+TK+MT  ++  + K+   +L++ + I+      N P+   +F  V    ++S  D+
Sbjct: 80  IASVTKLMTGLIV-LDAKQ---NLDEYISIT----IANTPEMKGVFSRVKLNSELSRRDV 131

Query: 122 NRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTP 181
               ++ S N A  ++A H  G   AF+  MNA A +LGM ++H+    GL   N+ ST 
Sbjct: 132 LLIALMSSENRAAASLAHHYPGGYAAFIAAMNAKAKALGMTSTHYVEPTGLSIHNV-STA 190

Query: 182 YDLA-LLGQALIRDVPEEYAIYSEQKFTYN----GITQYNRNGLLWDKSMNVDGIKTGHT 236
            DL  LL  A    +  E +   E+  T+      +   N + L+   + ++   KTG T
Sbjct: 191 RDLTKLLIAARKYPLLSELSTTKEKTVTFRKPVYSLGFRNTDHLVHKANWDIQLTKTGFT 250

Query: 237 SGAGYNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSY 277
           + AG+ LV     GN  +  V++    +    A++ ++ S+
Sbjct: 251 NQAGHCLVLVTKMGNRPMALVILDAFGKYTHFADASRIRSW 291