Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., penicillin-binding protein 6, Serine peptidase, MEROPS family S11 from Pseudomonas syringae pv. syringae B728a

 Score =  362 bits (930), Expect = e-105
 Identities = 185/378 (48%), Positives = 256/378 (67%), Gaps = 4/378 (1%)

Query: 14  ITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDTKLSPASLTKMMTS 73
           + + + ++ T +A+  +TP APQ+AAK YVLMD  SG VL E   D +L+PASLTK+MT+
Sbjct: 21  LLVPLIITPTVWAAEQMTPAAPQLAAKSYVLMDATSGNVLVENNGDQRLAPASLTKLMTA 80

Query: 74  YVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDA 133
           Y+   E++RG I  ND V IS+NAW       S+MF++VG+ V VSDL  GIIIQSGNDA
Sbjct: 81  YIATLEIRRGQIGENDPVTISENAWRTG---GSRMFIKVGSQVTVSDLLHGIIIQSGNDA 137

Query: 134 CVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTPYDLALLGQALIR 193
            VA++EH+AG+EDAF D+MN  A  LGM NSHF N  GL +P  YS+ +D+A+L +A+I 
Sbjct: 138 SVAISEHIAGSEDAFADMMNKTAGDLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAIIH 197

Query: 194 DVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMR 253
           + P  YAIYS+++F +NGI Q NRN LLW +   VDG+KTGHT  AGY +VSSA    MR
Sbjct: 198 EDPAHYAIYSQKEFFWNGIKQPNRNLLLW-RDKTVDGLKTGHTDEAGYCMVSSAVRDGMR 256

Query: 254 LVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIWMGDKDTIALGVDK 313
           L+AVV GT++E AR AE++KLL+YGFRFFET   ++ G      T+W G +  +  G+ +
Sbjct: 257 LIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWKGTERQVKAGLAE 316

Query: 314 DTYVTLPRGQAKDLTASFVLEKQLKAPLKKGDIVGTLYYQLAGNDIAQYPLLALEDVQEG 373
           D  +T+P+G  K L+AS  +  QL AP+ KGD++G +  +     +    L+AL+ V+EG
Sbjct: 317 DLSMTMPKGDMKKLSASMTMNPQLVAPIAKGDVIGKVEVKKDDQVVHTANLIALDGVEEG 376

Query: 374 SLFSRLWDYLVLLFKSWF 391
            +F R+WD + L F   F
Sbjct: 377 GIFRRVWDSIRLFFYGLF 394