Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  144 bits (363), Expect = 6e-39
 Identities = 93/250 (37%), Positives = 138/250 (55%), Gaps = 6/250 (2%)

Query: 29  IVTPDAPQIAAKGY--VLMDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKRGNIS 86
           ++T  AP  A   Y  +++D  +GKVL  ++ D    PASLTKMMT Y+  + ++ G IS
Sbjct: 39  VLTFSAPAFANSKYAGIVVDAKTGKVLYGEDADQLRYPASLTKMMTLYLTFEALEAGRIS 98

Query: 87  LNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVAGTED 146
            +  V  SK A A+     SK+ V  G ++ V      ++ +S NDA  A+ E + G+E 
Sbjct: 99  KSTPVPFSKKASAE---PPSKLGVRAGRSITVEQAILSLVTRSANDAATALGELLGGSEQ 155

Query: 147 AFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTPYDLALLGQALIRDVPEEYAIYSEQK 206
            F  +M   A +LGM  + + N+HGL +    +T  D A LG AL +  P+ Y  +S + 
Sbjct: 156 RFARMMTNKARALGMTRTTYRNAHGLPNSEQRTTARDQARLGIALRQHFPQYYDYFSTRS 215

Query: 207 FTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRLVAVVMGTDNENA 266
           F +   T  N N LL      VDGIKTG+T  +G+NLV+SA      +VAVVMG  +  A
Sbjct: 216 FRFGKQTIGNHNRLL-GNVRGVDGIKTGYTRASGFNLVTSAQLDGRSIVAVVMGGTSGGA 274

Query: 267 RKAESKKLLS 276
           R A+ +KL++
Sbjct: 275 RDAQMRKLVA 284