Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., penicillin-binding protein from Sinorhizobium meliloti 1021

 Score =  153 bits (387), Expect = 7e-42
 Identities = 92/253 (36%), Positives = 145/253 (57%), Gaps = 4/253 (1%)

Query: 38  AAKGYVLMDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNA 97
           +A   +++D  + KV   +++  +  PASLTK+MT+Y   + ++ G ++L   VV++KNA
Sbjct: 17  SANPRLVIDVDTLKVYEHQDIFQRWYPASLTKLMTAYTTFRAIQAGQLTLQSPVVMTKNA 76

Query: 98  WAKNFPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWAS 157
            ++     SKMF + G  + +    + ++I+S ND  VA+AE V G+E AF++ MNA A 
Sbjct: 77  ASE---PPSKMFYKPGQKMTLDSALKMMLIKSANDVAVAIAETVGGSEQAFIEKMNAEAR 133

Query: 158 SLGMKNSHFTNSHGLDDPNLYSTPYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNR 217
            +GM +SHF N +GL     Y+T  DLA+L   L R+ P+  + ++ + FT  G   Y  
Sbjct: 134 RIGMTSSHFINPNGLPGQGQYTTARDLAVLAVTLKREFPQYASYFALEGFT-TGKKDYPN 192

Query: 218 NGLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSY 277
             +L  +    DG+KTG    +G+N VSSA+ G  R+V+VV+G D+  AR  ES +LL  
Sbjct: 193 YNMLIGRFDGADGMKTGFICASGFNQVSSASRGGRRVVSVVLGEDSLAARADESARLLQM 252

Query: 278 GFRFFETVAPHKA 290
            F    T  P  A
Sbjct: 253 AFTTVSTGKPSLA 265