Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  535 bits (1378), Expect = e-157
 Identities = 261/390 (66%), Positives = 318/390 (81%)

Query: 1   MKKSILKSVLASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDT 60
           M K I  S   S + L+I  +S   A P V PDAP +AAK YVLMDYH+G+++AE+    
Sbjct: 1   MMKVIKPSAPKSMLLLAIMSASAFAAPPTVVPDAPSVAAKAYVLMDYHTGQIIAEEHAYE 60

Query: 61  KLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSD 120
           +L+PASLTKMMTSYVIG E+K GNIS  DDV I+KNAW+KNFPDSSKMF+EVG TVK +D
Sbjct: 61  QLNPASLTKMMTSYVIGHEMKVGNISPEDDVTITKNAWSKNFPDSSKMFIEVGKTVKAAD 120

Query: 121 LNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYST 180
           LNRGIIIQSGNDACVAMAEH+AGTEDAFVD+MN+WA  LGM +S+F NSHGLD  N  +T
Sbjct: 121 LNRGIIIQSGNDACVAMAEHIAGTEDAFVDMMNSWAKQLGMTDSYFENSHGLDSDNHKTT 180

Query: 181 PYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAG 240
            YD+A+LG ALIRDVPEEY IYSE++FT+NGI QYNRNGLLWDKSMNVDGIKTGHTSGAG
Sbjct: 181 AYDMAILGAALIRDVPEEYRIYSEKEFTFNGIKQYNRNGLLWDKSMNVDGIKTGHTSGAG 240

Query: 241 YNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIW 300
           YNLV+SAT+ +MRL++VVMG  +E +RKAESKKLLSYGFRFFETV P+KAG++FVN+ IW
Sbjct: 241 YNLVASATQDDMRLISVVMGASSEASRKAESKKLLSYGFRFFETVTPYKAGDSFVNQQIW 300

Query: 301 MGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQLKAPLKKGDIVGTLYYQLAGNDIA 360
            GD++++ LGV  DT +T+ RG+ K+L A+F L K L+APL KG++VG +Y+QL G DIA
Sbjct: 301 YGDRESVDLGVATDTPLTIRRGKGKELQANFELTKPLEAPLAKGEVVGRVYFQLDGKDIA 360

Query: 361 QYPLLALEDVQEGSLFSRLWDYLVLLFKSW 390
           Q+PL+ L++V EGS FS+L DY   L  SW
Sbjct: 361 QFPLVTLQEVNEGSWFSKLMDYFKQLVASW 390